Rv0722

Tuberculist information
Gene namerpmD
Protein function50S ribosomal protein L30 RpmD
Functional category(tuberculist)information pathways
Gene location(kb)814.993
Molecular mass(da)7346.54
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 65
	  		  	1    MSQLKITQVRSTIGARWKQRESLRTLGLRRIRHSVIREDNAATRGLIAVVRHLVEVEPAQ   60
			  	61   TGGKT

Known structures in the PDB
No Known structures
1 7 13 19 25 31 37 43 49 55 61 Range: 3 to 54  |  Coverage: 78% Ribosomal_L30 Range: 1 to 60  |  Coverage: 90% 1 Range: 1 to 61  |  Coverage: 92% 1
Number of amino acids : 65
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
Ribosomal_L30PF003273-54
Mtb Structural Proteome models
Model Number1
Model nameRv0722
Template1BXY    APDBCREDO
Template coverage1_60
Template Identity(%)41.7
Model coverage(%)90.8
Normalized DOPE score-1.386

Structure Models from Chopin
Model Number1
Profiled.59.1.1 - 3.30.1390.20
Click for model details
zscore14
Residue begin1
Residue end61
Binding pockets
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv0722Gene nameConfidence Score
Rv0720rplR0.999
Rv0715rplX0.999
Rv0721rpsE0.999
Rv0721rpsE0.999
Rv0723rplO0.999
Rv3456crplQ0.999
Rv0719rplF0.999
Rv0716rplE0.997
Rv0716rplE0.997
Rv0714rplN0.997
Rv0706rplV0.996
Rv0708rplP0.996
Rv0718rpsH0.996
Rv0703rplW0.995
Rv0701rplC0.994
Rv0704rplB0.994
Rv0704rplB0.994
Rv0702rplD0.992
Rv3459crpsK0.991
Rv0705rpsS0.99
Rv3460crpsM0.988
Rv0700rpsJ0.986
Rv0707rpsC0.985
Rv0707rpsC0.985
Rv0710rpsQ0.985
Rv3458crpsD0.984
Rv3458crpsD0.984
Rv3457crpoA0.982
Rv0732secY0.982
Rv3457crpoA0.982
Rv3457crpoA0.982
Rv3443crplM0.981
Rv0682rpsL0.979
Rv0683rpsG0.978
Rv2057crpmG10.976
Rv0641rplA0.976
Rv2904crplS0.974
Rv0652rplL0.974
Rv0640rplK0.974
Rv0640rplK0.974
Rv0717rpsN10.972
Rv0651rplJ0.965
Rv2056crpsN20.965
Rv2441crpmA0.964
Rv2442crplU0.963
Rv0684fusA10.957
Rv0684fusA10.957
Rv0684fusA10.957
Rv0684fusA10.957
Rv0684fusA10.957
Rv0709rpmC0.95
Rv1298rpmE0.938
Rv0056rplI0.937
Rv0056rplI0.937
Rv3442crpsI0.936
Rv1643rplT0.935
Rv3461crpmJ0.927
Rv3462cinfA0.923
Rv0685tuf0.914
Rv0685tuf0.914
Rv0685tuf0.914
Rv2890crpsB0.906
Rv0734mapA0.903
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
No high confidence interactions