Tuberculist information
Gene namepta
Protein functionProbable phosphate acetyltransferase Pta (phosphotransacetylase)
Functional category(tuberculist)intermediary metabolism and respiration
Gene location(kb)491.786
Molecular mass(da)72930.5
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 690
	  		  	1    LADSSAIYLAAPESQTGKSTIALGLLHRLTAMVAKVGVFRPITRLSAERDYILELLLAHT   60
			  	61   SAGLPYERCVGVTYQQLHADRDDAIAEIVDSYHAMADECDAVVVVGSDYTDVTSPTELSV  120
			  	121  NGRIAVNLGAPVLLTVRAKDRTPDQVASVVEVCLAELDTQRAHTAAVVANRCELSAIPAV  180
			  	181  TDALRRFTPPSYVVPEEPLLSAPTVAELTQAVNGAVVSGDVALREREVMGVLAAGMTADH  240
			  	241  VLERLTDGMAVITPGDRSDVVLAVASAHAAEGFPSLSCIVLNGGFQLHPAIAALVSGLRL  300
			  	301  RLPVIATALGTYDTASAAASARGLVTATSQRKIDTALELMDRHVDVAGLLAQLTIPIPTV  360
			  	361  TTPQMFTYRLLQQARSDLMRIVLPEGDDDRILKSAGRLLQRGIVDLTILGDEAKVRLRAA  420
			  	421  ELGVDLDGATVIEPCASELHDQFADQYAQLRKAKGITVEHAREIMNDATYFGTMLVHNCH  480
			  	481  ADGMVSGAAHTTAHTVRPALEIIKTVPGISTVSSIFLMCLPDRVLAYGDCAIIPNPTVEQ  540
			  	541  LADIAICSARTAAQFGIEPRVAMLSYSTGDSGKGADVDKVRAATELVRAREPQLPVEGPI  600
			  	601  QYDAAVEPSVAATKLRDSPVAGRATVLIFPDLNTGNNTYKAVQRSAGAIAIGPVLQGLRK  660
			  	661  PVNDLSRGALVDDIVNTVAITAIQAQGVHE
			  			

Known structures in the PDB
No Known structures
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
AAA_26PF135005-204
DRTGGPF07085207-321
PTA_PTBPF01515365-682
Mtb Structural Proteome models
Model Number1
Model nameRv0408
Template1R5J    APDBCREDO
Template coverage19_326
Template Identity(%)48.5
Model coverage(%)44.3
Normalized DOPE score-1.101

Model Number2
Model nameRv0408.1
Template1BYI    APDBCREDO
Template coverage1_224
Template Identity(%)17.3
Model coverage(%)30.8
Normalized DOPE score-0.491

Structure Models from Chopin
Model Number1
Profilec.77.1.5
Click for model details
zscore71.96
Residue begin365
Residue end682
Model Number2
Profilec.98.2.2 - 3.40.1390.20
Click for model details
zscore15.96
Residue begin207
Residue end321
Model Number3
Profilec.37.1.10 - 3.40.50.300
Click for model details
zscore11.27
Residue begin5
Residue end204
Binding pockets
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv0408Gene nameConfidence Score
Rv0409ackA0.999
Rv3667acs0.992
Rv3667acs0.992
Rv3535chsaG0.986
Rv3535chsaG0.986
Rv2495cbkdC0.985
Rv2495cbkdC0.985
Rv2495cbkdC0.985
Rv1617pykA0.968
Rv1617pykA0.968
Rv3028cfixB0.956
Rv3028cfixB0.956
Rv1074cfadA30.95
Rv1074cfadA30.95
Rv1323fadA40.949
Rv1323fadA40.949
Rv3556cfadA60.945
Rv3556cfadA60.945
Rv0904caccD30.944
Rv1837cglcB0.944
Rv0859fadA0.942
Rv0859fadA0.942
Rv3029cfixA0.941
Rv1437pgk0.935
Rv3546fadA50.934
Rv3546fadA50.934
Rv0243fadA20.931
Rv0243fadA20.931
Rv1018cglmU0.926
Rv1018cglmU0.926
Rv0914cRv0914c0.921
Rv0914cRv0914c0.921
Rv2455cRv2455c0.919
Rv2455cRv2455c0.919
Rv0973caccA20.918
Rv0973caccA20.918
Rv0973caccA20.918
Rv0973caccA20.918
Rv0975cfadE130.914
Rv0975cfadE130.914
Rv0975cfadE130.914
Rv1436gap0.913
Rv1436gap0.913
Rv0753cmmsA0.912
Rv3280accD50.91
Rv3710leuA0.909
Rv3710leuA0.909
Rv0154cfadE20.907
Rv0154cfadE20.907
Rv3140fadE230.907
Rv0154cfadE20.907
Rv3140fadE230.907
Rv2922AacyP0.902
Potential ligand/drug binding sites
Protein ModelPocket NumberDrug Binding Site PMIN ScorePvalue PMINPMAX ScorePvalue PMAX
Rv0408.111c6z_ROC_B_505PDBCREDO0.6670.1080.6670.001
Rv0408.113el4_ROC_A_100PDBCREDO0.7200.0660.6540.001
Rv0408.113ufn_ROC_A_401PDBCREDO0.7220.0650.6520.001
Rv0408.132nni_MTK_A_501PDBCREDO0.6630.1120.6440.001
Rv0408.113sm2_478_A_126PDBCREDO0.6580.1160.6420.001
Rv0408.131sa1_POD_B_700PDBCREDO0.6770.1000.6390.001
Rv0408.133ut5_LOC_D_502PDBCREDO0.7570.0440.6320.001
Rv0408.112q64_1UN_B_1001PDBCREDO0.6300.1450.6300.001
Rv0408.133ut5_LOC_B_502PDBCREDO0.7090.0740.6290.001
Rv0408.112qak_1UN_A_1001PDBCREDO0.6290.1460.6290.001
Rv0408.112q63_1UN_A_1001PDBCREDO0.6270.1480.6270.001
Rv0408.133frq_ERY_A_195PDBCREDO0.6460.1290.6270.001
Rv0408.112pyn_1UN_A_1001PDBCREDO0.6270.1490.6270.001
Rv0408.112pym_1UN_A_1001PDBCREDO0.6250.1500.6250.001
Rv0408.112qxs_RAL_B_600PDBCREDO0.7490.0480.6250.001
Rv0408.112qxs_RAL_A_600PDBCREDO0.7490.0490.6240.001
Rv0408.131sa1_POD_D_701PDBCREDO0.6810.0960.6240.001
Rv0408.131hwk_117_B_1PDBCREDO0.6190.1570.6190.001
Rv0408.113cs9_NIL_C_600PDBCREDO0.6980.0830.6140.002
Rv0408.113cs9_NIL_D_600PDBCREDO0.6920.0870.6090.002
Rv0408.113el5_1UN_B_201PDBCREDO0.6240.1520.6080.002
Rv0408.112nnk_ROC_A_401PDBCREDO0.6540.1200.6080.002
Rv0408.112f80_017_B_301PDBCREDO0.6080.1690.6080.002
Rv0408.111n49_RIT_B_301PDBCREDO0.7460.0500.6050.002
Rv0408.111t46_STI_A_3PDBCREDO0.6870.0910.6050.002
Rv0408.113gp0_NIL_A_1PDBCREDO0.6680.1080.6030.002
Rv0408.111rl8_RIT_A_9001PDBCREDO0.6160.1600.6010.002
Rv0408.113ndt_ROC_D_100PDBCREDO0.6460.1280.6000.002
Rv0408.111xkk_FMM_A_91PDBCREDO0.6460.1290.5980.002
Rv0408.113prs_RIT_A_1001PDBCREDO0.6130.1640.5980.002
Rv0408.133e22_LOC_D_700PDBCREDO0.7150.0700.5970.002
Rv0408.111c6y_MK1_B_524PDBCREDO0.6970.0830.5970.002
Rv0408.113el9_DR7_A_100PDBCREDO0.6950.0840.5960.002
Rv0408.131uwj_BAX_A_1723PDBCREDO0.6130.1640.5960.002
Rv0408.133e22_LOC_B_700PDBCREDO0.7120.0720.5940.002
Rv0408.113d1y_ROC_A_201PDBCREDO0.6090.1680.5940.002
Rv0408.111hxb_ROC_A_100PDBCREDO0.5930.1880.5930.002
Rv0408.113s56_ROC_A_201PDBCREDO0.6920.0870.5930.002
Rv0408.111t7i_017_A_200PDBCREDO0.6490.1250.5890.003
Rv0408.113ogq_AB1_A_200PDBCREDO0.6190.1570.5890.003
Rv0408.113ekq_ROC_A_100PDBCREDO0.7060.0760.5890.003
Rv0408.113k4v_ROC_D_201PDBCREDO0.6630.1120.5870.003
Rv0408.113bvb_017_B_401PDBCREDO0.6160.1610.5860.003
Rv0408.113ggu_017_B_201PDBCREDO0.6300.1450.5840.003
Rv0408.111ya4_CTX_A_1PDBCREDO0.6120.1650.5830.003
Rv0408.111k6c_MK1_B_902PDBCREDO0.6420.1330.5820.003
Rv0408.131xkk_FMM_A_91PDBCREDO0.7240.0640.5820.003
Rv0408.113pww_ROC_A_1001PDBCREDO0.6590.1160.5800.003
Rv0408.112fxd_DR7_A_102PDBCREDO0.6760.1000.5790.003
Rv0408.131z2b_VLB_C_800PDBCREDO0.6320.1430.5790.003
Rv0408.111n49_RIT_D_401PDBCREDO0.7760.0340.5790.003
Rv0408.133frq_ERY_B_195PDBCREDO0.6920.0870.5780.003
Rv0408.113el0_1UN_A_201PDBCREDO0.7310.0590.5770.003
Rv0408.131hwk_117_A_2PDBCREDO0.6030.1760.5690.004
Rv0408.131hwk_117_C_4PDBCREDO0.6020.1770.5680.004
Rv0408.113pwr_ROC_A_401PDBCREDO0.5960.1840.5670.004
Rv0408.131uwj_BAX_B_1723PDBCREDO0.6010.1780.5670.004
Rv0408.113cs9_NIL_B_600PDBCREDO0.6770.0990.5650.004
Rv0408.113ndu_ROC_D_100PDBCREDO0.6670.1090.5640.004
Rv0408.131hwl_FBI_B_1PDBCREDO0.6160.1600.5640.004
Rv0408.133d91_REM_A_350PDBCREDO0.5980.1820.5640.004
Rv0408.133d91_REM_B_350PDBCREDO0.5980.1820.5640.004
Rv0408.111opj_STI_A_3PDBCREDO0.6950.0850.5640.004
Rv0408.113cs9_NIL_A_600PDBCREDO0.6950.0850.5640.004
Rv0408.131hwl_FBI_D_3PDBCREDO0.6140.1620.5620.004
Rv0408.112nnp_ROC_A_401PDBCREDO0.6190.1560.5620.004
Rv0408.131uwh_BAX_B_1723PDBCREDO0.6290.1460.5590.004
Rv0408.111opj_STI_B_4PDBCREDO0.6880.0900.5580.004
Rv0408.113lzv_017_A_200PDBCREDO0.7070.0750.5580.004
Rv0408.131uwh_BAX_A_1723PDBCREDO0.6270.1480.5570.004
Rv0408.111hxw_RIT_B_301PDBCREDO0.6010.1780.5570.004
Rv0408.112aqu_DR7_B_300PDBCREDO0.5710.2160.5560.004
Rv0408.133tkd_CYZ_B_267PDBCREDO0.6250.1500.5550.005
Rv0408.112nmy_ROC_A_401PDBCREDO0.6700.1050.5550.005
Rv0408.113oxx_DR7_A_100PDBCREDO0.5680.2190.5540.005
Rv0408.113ekx_1UN_B_201PDBCREDO0.5820.2010.5530.005
Rv0408.133spk_TPV_B_100PDBCREDO0.5690.2170.5530.005
Rv0408.133bjw_SVR_E_503PDBCREDO0.6360.1390.5530.005
Rv0408.112r5p_MK1_B_902PDBCREDO0.5960.1830.5530.005
Rv0408.113so9_017_A_100PDBCREDO0.8340.0140.5520.005
Rv0408.112r5p_MK1_D_902PDBCREDO0.5960.1840.5520.005
Rv0408.113spk_TPV_B_100PDBCREDO0.7620.0410.5520.005
Rv0408.131t46_STI_A_3PDBCREDO0.6510.1240.5510.005
Rv0408.131hwl_FBI_A_2PDBCREDO0.6020.1770.5510.005
Rv0408.131hwl_FBI_C_4PDBCREDO0.6020.1770.5510.005
Rv0408.113rgf_BAX_A_465PDBCREDO0.7180.0680.5510.005
Rv0408.112fxe_DR7_A_102PDBCREDO0.5920.1890.5490.005
Rv0408.113em4_DR7_V_100PDBCREDO0.5920.1890.5480.005
Rv0408.113oxx_DR7_C_100PDBCREDO0.5620.2280.5480.005
Rv0408.113ucb_017_A_201PDBCREDO0.5890.1930.5470.005
Rv0408.113eky_DR7_A_100PDBCREDO0.5890.1920.5460.005
Rv0408.131hwk_117_D_3PDBCREDO0.6150.1620.5460.005
Rv0408.111hsh_MK1_A_401PDBCREDO0.6370.1370.5460.005
Rv0408.131hwi_115_B_1PDBCREDO0.6520.1230.5440.006
Rv0408.111sdv_MK1_B_902PDBCREDO0.6180.1580.5440.006
Rv0408.112avv_MK1_E_902PDBCREDO0.5980.1810.5430.006
Rv0408.112v0z_C41_C_1328PDBCREDO0.5570.2350.5430.006
Rv0408.112aoi_FRD_C_305PDBCREDO0.5420.2550.5420.006
Rv0408.133h52_486_B_1PDBCREDO0.5920.1890.5420.006
Rv0408.112w8y_486_A_1000PDBCREDO0.7710.0370.5420.006
Rv0408.131hwi_115_D_3PDBCREDO0.6480.1260.5410.006
Rv0408.133sm2_478_A_126PDBCREDO0.7050.0770.5390.006
Rv0408.111ohr_1UN_A_201PDBCREDO0.6290.1460.5390.006
Rv0408.113h52_486_A_3PDBCREDO0.8130.0200.5380.006
Rv0408.111hsh_MK1_C_402PDBCREDO0.6270.1480.5370.006
Rv0408.132oax_SNL_E_5001PDBCREDO0.5850.1980.5350.006
Rv0408.112avv_MK1_A_901PDBCREDO0.5900.1910.5350.006
Rv0408.111sdt_MK1_B_902PDBCREDO0.5620.2270.5350.006
Rv0408.111sh9_RIT_B_301PDBCREDO0.6250.1510.5350.006
Rv0408.131lhv_NOG_A_301PDBCREDO0.6610.1140.5340.006
Rv0408.113h52_486_B_1PDBCREDO0.7820.0320.5340.007
Rv0408.133b0w_DGX_A_1PDBCREDO0.5650.2230.5330.007
Rv0408.133h52_486_D_2PDBCREDO0.6000.1800.5330.007
Rv0408.132oax_SNL_F_6001PDBCREDO0.5810.2030.5320.007
Rv0408.133tkd_CYZ_A_266PDBCREDO0.6360.1390.5310.007
Rv0408.112xkw_P1B_A_1478PDBCREDO0.5580.2330.5300.007
Rv0408.113k5v_STI_A_2PDBCREDO0.6720.1040.5300.007
Rv0408.132oax_SNL_D_4001PDBCREDO0.5780.2060.5300.007
Rv0408.113kk6_CEL_A_701PDBCREDO0.5710.2160.5290.007
Rv0408.113ogp_017_B_200PDBCREDO0.7080.0750.5270.007
Rv0408.111tco_FK5_C_509PDBCREDO0.5540.2380.5270.007
Rv0408.113tkg_ROC_C_901PDBCREDO0.6080.1690.5270.007
Rv0408.132oax_SNL_A_1001PDBCREDO0.5750.2100.5270.007
Rv0408.132v0z_C41_O_1327PDBCREDO0.6380.1370.5260.007
Rv0408.113oez_STI_A_601PDBCREDO0.7060.0760.5260.007
Rv0408.113oxc_ROC_A_401PDBCREDO0.6940.0850.5260.007
Rv0408.113h52_486_D_2PDBCREDO0.7930.0280.5250.007
Rv0408.133b0w_DGX_B_1PDBCREDO0.5540.2380.5230.008
Rv0408.112v0z_C41_O_1327PDBCREDO0.5800.2040.5230.008
Rv0408.112r5q_1UN_D_900PDBCREDO0.7210.0660.5220.008
Rv0408.133kk6_CEL_A_701PDBCREDO0.6490.1260.5220.008
Rv0408.112r5q_1UN_B_900PDBCREDO0.7200.0660.5220.008
Rv0408.112o4k_DR7_A_301PDBCREDO0.5990.1800.5190.008
Rv0408.113cyx_ROC_A_201PDBCREDO0.6130.1640.5190.008
Rv0408.112aof_FRD_C_305PDBCREDO0.5850.1980.5180.008
Rv0408.132y6o_1N1_A_1892PDBCREDO0.6400.1340.5180.008
Rv0408.111err_RAL_B_600PDBCREDO0.8060.0230.5170.008
Rv0408.113pyy_STI_A_3PDBCREDO0.6940.0860.5170.008
Rv0408.133tne_RIT_A_401PDBCREDO0.6190.1570.5170.008
Rv0408.111err_RAL_A_600PDBCREDO0.8050.0230.5170.008
Rv0408.113ogp_017_A_200PDBCREDO0.7570.0440.5170.008
Rv0408.112pl0_STI_A_200PDBCREDO0.7570.0440.5160.009
Rv0408.133jwq_VIA_D_901PDBCREDO0.7290.0600.5160.009
Rv0408.112jfa_RAL_B_600PDBCREDO0.8040.0230.5160.009
Rv0408.111uwj_BAX_A_1723PDBCREDO0.6720.1040.5150.009
Rv0408.113pyy_STI_B_4PDBCREDO0.6910.0880.5150.009
Rv0408.113em4_DR7_A_100PDBCREDO0.6010.1780.5150.009
Rv0408.112hyy_STI_C_600PDBCREDO0.6900.0890.5140.009
Rv0408.111sgu_MK1_B_2632PDBCREDO0.6890.0900.5130.009
Rv0408.113mss_STI_B_1PDBCREDO0.6890.0900.5130.009
Rv0408.112hyy_STI_D_600PDBCREDO0.6880.0900.5130.009
Rv0408.113k5v_STI_B_2PDBCREDO0.6880.0900.5130.009
Rv0408.113ms9_STI_B_1PDBCREDO0.6880.0900.5130.009
Rv0408.111iep_STI_A_201PDBCREDO0.6880.0900.5130.009
Rv0408.131n49_RIT_D_401PDBCREDO0.5130.2990.5130.009
Rv0408.111iep_STI_B_202PDBCREDO0.6870.0910.5120.009
Rv0408.112hyy_STI_A_600PDBCREDO0.6870.0910.5120.009
Rv0408.113mss_STI_D_1PDBCREDO0.6870.0910.5120.009
Rv0408.114asd_BAX_A_1500PDBCREDO0.7290.0600.5120.009
Rv0408.113mss_STI_A_1PDBCREDO0.6860.0920.5110.009
Rv0408.113gvu_STI_A_1001PDBCREDO0.6860.0920.5110.009
Rv0408.113ms9_STI_A_1PDBCREDO0.6860.0920.5110.009
Rv0408.133bjw_SVR_B_501PDBCREDO0.6350.1390.5110.009
Rv0408.113mss_STI_C_1PDBCREDO0.6850.0920.5110.009
Rv0408.132oax_SNL_B_2001PDBCREDO0.6110.1660.5100.009
Rv0408.131hwi_115_A_2PDBCREDO0.6730.1030.5100.009
Rv0408.132ab2_SNL_A_502PDBCREDO0.6110.1660.5100.009
Rv0408.132ab2_SNL_B_503PDBCREDO0.6100.1670.5090.009
Rv0408.112aoj_FRD_C_305PDBCREDO0.7020.0790.5090.010
Rv0408.133bjw_SVR_F_502PDBCREDO0.6310.1430.5080.010
Rv0408.134asd_BAX_A_1500PDBCREDO0.5380.2610.5070.010
Rv0408.131uob_PNN_A_1311PDBCREDO0.5530.2400.5060.010
Rv0408.113k4v_ROC_B_201PDBCREDO0.7120.0720.5060.010
Rv0408.112jfa_RAL_A_600PDBCREDO0.8120.0210.5050.010
Rv0408.113ekw_DR7_B_100PDBCREDO0.5310.2710.5050.010
Rv0408.133vhu_SNL_A_1001PDBCREDO0.6050.1730.5050.010
Rv0408.133bjw_SVR_H_504PDBCREDO0.6270.1480.5040.010
Rv0408.112avo_MK1_B_902PDBCREDO0.5030.3130.5030.010
Rv0408.132oax_SNL_C_3001PDBCREDO0.6030.1760.5030.010
Rv0408.133kk6_CEL_B_1701PDBCREDO0.5620.2270.5030.010
Rv0408.133mnp_DEX_A_784PDBCREDO0.5840.1990.5030.010
Rv0408.113nuj_478_B_401PDBCREDO0.5020.3150.5020.011
Rv0408.113nu4_478_B_401PDBCREDO0.5710.2160.5020.011
Rv0408.113tkg_ROC_B_801PDBCREDO0.6920.0870.5020.011
Rv0408.113em3_478_B_200PDBCREDO0.5270.2760.5020.011
Rv0408.133spk_TPV_A_100PDBCREDO0.6840.0940.5010.011
Rv0408.113nuo_478_B_478PDBCREDO0.5550.2370.5010.011
Rv0408.111sdu_MK1_B_902PDBCREDO0.5260.2780.5010.011
Rv0408.114dqf_017_B_101PDBCREDO0.5260.2780.5000.011
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
Chemical NameConfidence scoreMolecular Weight
acetyl phosphatePubChem0.991140.032
acetyl-CoAPubChem0.987809.571
acetatePubChem0.98259.044
coenzyme APubChem0.976767.534
butyryl-CoAPubChem0.971837.624
propionyl-CoAPubChem0.968823.597
phosphatePubChem0.96396.9872
butyratePubChem0.96288.1051
formatePubChem0.96145.0174
Co-APubChem0.958767.534
NAD+PubChem0.943663.425
adenosine triphosphatePubChem0.934507.181
propionyl phosphatePubChem0.93154.058
crotonyl-CoAPubChem0.927835.608
carbon dioxidePubChem0.92144.0095
pyrophosphatePubChem0.903177.975
H(+)PubChem0.9022.01588
deuteriumPubChem0.9022.01588
adenosine monophosphatePubChem0.9347.221
protiumPubChem0.92.01576
pyruvic acidPubChem0.988.0621
butyryl phosphatePubChem0.9168.085
acetyl coenzyme-APubChem0.9809.571
reduced nicotinamide adenine dinucleotidePubChem0.9665.441
dihydronicotinamide formycin dinucleotidePubChem0.9665.441
adenosine diphosphatePubChem0.9427.201
[(2S,5S)-5-(6-aminopurin-9-yl)-4-hydroxy-2-[[[[(3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-[[3-oxo-3-[2-(1-oPubChem0.9833.592
glycerolPubChem0.80492.0938
thiamine pyrophosphatePubChem0.742425.314
selenomethioninePubChem0.74196.106
SeMetPubChem0.74196.106
acetate asPubChem0.736404.497
lactatePubChem0.72590.0779
CoASHPubChem0.7241049.79
acetaldehydePubChem0.71444.0526
sulfatePubChem0.70896.0626