Tuberculist information
Gene nameapt
Protein functionAdenine phosphoribosyltransferase Apt (APRT) (AMP diphosphorylase) (AMP pyrophosphorylase) (transphosphoribosidase)
Functional category(tuberculist)intermediary metabolism and respiration
Gene location(kb)2910.23
Molecular mass(da)23155.7
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 223
	  		  	1    VCHGGTWAGDYVLNVIATGLSLKARGKRRRQRWVDDGRVLALGESRRSSAISVADVVASL   60
			  	61   TRDVADFPVPGVEFKDLTPLFADRRGLAAVTEALADRASGADLVAGVDARGFLVAAAVAT  120
			  	121  RLEVGVLAVRKGGKLPRPVLSEEYYRAYGAATLEILAEGIEVAGRRVVIIDDVLATGGTI  180
			  	181  GATRRLLERGGANVAGAAVVVELAGLSGRAALAPLPVHSLSRL
			  			

Known structures in the PDB
No Known structures
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
PribosyltranPF0015679-201
Mtb Structural Proteome models
Model Number1
Model nameRv2584c
Template1ZN8    APDBCREDO
Template coverage6_179
Template Identity(%)41.8
Model coverage(%)75.8
Normalized DOPE score-0.127

Model Number2
Model nameRv2584c.1
Template1O57    APDBCREDO
Template coverage39_255
Template Identity(%)25.0
Model coverage(%)96.4
Normalized DOPE score0.754

Structure Models from Chopin
Model Number1
Profilec.61.1.1 - 3.40.50.2020
Click for model details
zscore12.13
Residue begin1
Residue end223
Binding pockets
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv2584cGene nameConfidence Score
Rv1389gmk0.996
Rv0777purB0.994
Rv0777purB0.994
Rv3396cguaA0.992
Rv3396cguaA0.992
Rv3396cguaA0.992
Rv0957purH0.99
Rv0957purH0.99
Rv0733adk0.988
Rv2583crelA0.986
Rv2583crelA0.986
Rv2583crelA0.986
Rv2583crelA0.986
Rv3624chpt0.985
Rv3309cupp0.975
Rv3307deoD0.974
Rv2202cadoK0.97
Rv3393iunH0.956
Rv3314cdeoA0.954
Rv3314cdeoA0.954
Rv3314cdeoA0.954
Rv1438tpi0.951
Rv1017cprsA0.949
Rv1017cprsA0.949
Rv1699pyrG0.944
Rv1699pyrG0.944
Rv3834cserS0.931
Rv3834cserS0.931
Rv1602hisH0.929
Rv2534cefp0.923
Rv2534cefp0.923
Rv2534cefp0.923
Rv2540caroF0.91
Rv0357cpurA0.903
Potential ligand/drug binding sites
Protein ModelPocket NumberDrug Binding Site PMIN ScorePvalue PMINPMAX ScorePvalue PMAX
Rv2584c.123erd_DES_B_800PDBCREDO0.7430.0520.7170.000
Rv2584c.121s9p_DES_A_459PDBCREDO0.7110.0720.7110.000
Rv2584c.121s9p_DES_D_600PDBCREDO0.7010.0800.7010.000
Rv2584c.123erd_DES_A_600PDBCREDO0.7230.0640.6980.000
Rv2584c.121mx1_THA_C_3PDBCREDO0.6840.0940.6840.000
Rv2584c.121mx1_THA_E_5PDBCREDO0.7160.0690.6660.001
Rv2584c.123bbt_FMM_D_91PDBCREDO0.7040.0770.6570.001
Rv2584c.121ya4_CTX_C_3PDBCREDO0.8090.0220.6460.001
Rv2584c.121ya4_CTX_B_2PDBCREDO0.8070.0220.6450.001
Rv2584c.123oht_1N1_B_1000PDBCREDO0.6450.1300.6450.001
Rv2584c.122j7y_E3O_A_1454PDBCREDO0.7350.0570.6350.001
Rv2584c.123ols_EST_A_600PDBCREDO0.8070.0220.6190.001
Rv2584c.123ols_EST_B_600PDBCREDO0.8070.0220.6190.001
Rv2584c.121g50_EST_A_600PDBCREDO0.8040.0230.6170.002
Rv2584c.123uud_EST_A_600PDBCREDO0.8040.0230.6170.002
Rv2584c.122yja_EST_B_1550PDBCREDO0.8020.0240.6150.002
Rv2584c.123uud_EST_B_600PDBCREDO0.8020.0240.6150.002
Rv2584c.123spk_TPV_A_100PDBCREDO0.6790.0980.6120.002
Rv2584c.121qkn_RAL_A_600PDBCREDO0.7240.0640.6110.002
Rv2584c.123bbt_FMM_B_91PDBCREDO0.7030.0780.6070.002
Rv2584c.122fum_MIX_D_3539PDBCREDO0.6370.1370.5940.002
Rv2584c.121err_RAL_B_600PDBCREDO0.7730.0360.5930.002
Rv2584c.121err_RAL_A_600PDBCREDO0.7720.0360.5920.002
Rv2584c.122jfa_RAL_A_600PDBCREDO0.7480.0490.5920.002
Rv2584c.122jfa_RAL_B_600PDBCREDO0.7690.0380.5900.003
Rv2584c.121mx1_THA_D_4PDBCREDO0.7370.0550.5890.003
Rv2584c.121mx1_THA_F_6PDBCREDO0.7370.0550.5890.003
Rv2584c.123h0a_9RA_A_500PDBCREDO0.6300.1450.5870.003
Rv2584c.111uwj_BAX_A_1723PDBCREDO0.6210.1540.5870.003
Rv2584c.121jg2_ADN_A_500PDBCREDO0.6070.1710.5860.003
Rv2584c.121sqn_NDR_A_1001PDBCREDO0.5860.1960.5860.003
Rv2584c.121s9p_DES_C_500PDBCREDO0.7320.0590.5850.003
Rv2584c.121sqn_NDR_B_2001PDBCREDO0.5830.2000.5830.003
Rv2584c.121s9p_DES_B_459PDBCREDO0.7270.0620.5810.003
Rv2584c.111uwj_BAX_B_1723PDBCREDO0.5940.1870.5760.003
Rv2584c.122h77_T3_A_1PDBCREDO0.6380.1360.5760.003
Rv2584c.123oht_1N1_A_1000PDBCREDO0.6400.1340.5740.003
Rv2584c.113mss_STI_C_1PDBCREDO0.5880.1930.5710.004
Rv2584c.112hyy_STI_A_600PDBCREDO0.5840.1980.5680.004
Rv2584c.113mss_STI_A_1PDBCREDO0.5840.1980.5680.004
Rv2584c.122fum_MIX_A_539PDBCREDO0.5880.1930.5680.004
Rv2584c.121gs4_ZK5_A_1918PDBCREDO0.5870.1950.5660.004
Rv2584c.113ms9_STI_A_1PDBCREDO0.5820.2010.5660.004
Rv2584c.112hyy_STI_D_600PDBCREDO0.5820.2010.5650.004
Rv2584c.113mss_STI_B_1PDBCREDO0.5820.2010.5650.004
Rv2584c.113pyy_STI_A_3PDBCREDO0.5820.2010.5650.004
Rv2584c.112hyy_STI_C_600PDBCREDO0.5810.2020.5640.004
Rv2584c.113mss_STI_D_1PDBCREDO0.5810.2020.5640.004
Rv2584c.113pyy_STI_B_4PDBCREDO0.5810.2020.5640.004
Rv2584c.111iep_STI_B_202PDBCREDO0.5810.2030.5640.004
Rv2584c.123uvv_T3_A_501PDBCREDO0.6900.0890.5640.004
Rv2584c.113k5v_STI_B_2PDBCREDO0.5800.2040.5640.004
Rv2584c.123gws_T3_X_500PDBCREDO0.6670.1080.5630.004
Rv2584c.111iep_STI_A_201PDBCREDO0.5800.2040.5630.004
Rv2584c.113ms9_STI_B_1PDBCREDO0.5790.2050.5620.004
Rv2584c.121bsx_T3_A_1PDBCREDO0.6660.1090.5620.004
Rv2584c.121bsx_T3_B_2PDBCREDO0.6660.1090.5620.004
Rv2584c.121fm6_BRL_D_503PDBCREDO0.5620.2270.5620.004
Rv2584c.113gvu_STI_A_1001PDBCREDO0.5770.2070.5610.004
Rv2584c.121ya3_STR_A_1001PDBCREDO0.5800.2040.5600.004
Rv2584c.121xzx_T3_X_500PDBCREDO0.6840.0940.5590.004
Rv2584c.121mx1_THA_B_2PDBCREDO0.7580.0440.5580.004
Rv2584c.121zgy_BRL_A_503PDBCREDO0.6180.1580.5580.004
Rv2584c.122xkw_P1B_B_1475PDBCREDO0.5770.2070.5570.004
Rv2584c.123oct_1N1_A_663PDBCREDO0.5760.2090.5560.005
Rv2584c.123k54_1N1_A_1PDBCREDO0.5960.1840.5550.005
Rv2584c.123adx_IMN_B_3PDBCREDO0.7210.0660.5530.005
Rv2584c.123h52_486_C_4PDBCREDO0.5730.2130.5530.005
Rv2584c.123oll_EST_B_600PDBCREDO0.8160.0190.5530.005
Rv2584c.122h79_T3_A_1PDBCREDO0.6330.1410.5520.005
Rv2584c.122gqg_1N1_A_501PDBCREDO0.5720.2140.5520.005
Rv2584c.122prg_BRL_A_1PDBCREDO0.5520.2410.5520.005
Rv2584c.121ere_EST_D_600PDBCREDO0.8130.0200.5510.005
Rv2584c.123oll_EST_A_600PDBCREDO0.8130.0200.5510.005
Rv2584c.121ere_EST_F_600PDBCREDO0.8110.0210.5490.005
Rv2584c.121pcg_EST_A_1PDBCREDO0.8110.0210.5490.005
Rv2584c.121ere_EST_C_600PDBCREDO0.8100.0210.5490.005
Rv2584c.111uwh_BAX_A_1723PDBCREDO0.6000.1790.5490.005
Rv2584c.112hyy_STI_B_600PDBCREDO0.5820.2010.5490.005
Rv2584c.121nhz_486_A_800PDBCREDO0.6080.1700.5480.005
Rv2584c.111uwh_BAX_B_1723PDBCREDO0.5990.1800.5480.005
Rv2584c.121a52_EST_A_1PDBCREDO0.8090.0220.5480.005
Rv2584c.121a52_EST_B_2PDBCREDO0.8090.0220.5480.005
Rv2584c.114asd_BAX_A_1500PDBCREDO0.5630.2260.5470.005
Rv2584c.122j7x_EST_A_1454PDBCREDO0.8070.0220.5460.005
Rv2584c.123heg_BAX_A_1PDBCREDO0.7570.0440.5460.005
Rv2584c.121qkt_EST_A_600PDBCREDO0.8060.0230.5460.005
Rv2584c.122q1v_PDN_A_248PDBCREDO0.5650.2230.5460.005
Rv2584c.112vn1_FK5_A_501PDBCREDO0.6110.1660.5460.005
Rv2584c.123hm1_J3Z_B_1PDBCREDO0.8050.0230.5450.005
Rv2584c.122ocf_EST_A_596PDBCREDO0.8040.0230.5440.005
Rv2584c.121jg3_ADN_A_500PDBCREDO0.5850.1980.5440.006
Rv2584c.113oez_STI_A_601PDBCREDO0.5600.2310.5440.006
Rv2584c.123qt0_486_A_4PDBCREDO0.5800.2040.5410.006
Rv2584c.1112uxp_CLM_B_1211PDBCREDO0.5400.2580.5400.006
Rv2584c.123lfa_1N1_A_361PDBCREDO0.7640.0400.5400.006
Rv2584c.121a28_STR_A_1PDBCREDO0.5390.2600.5390.006
Rv2584c.121g50_EST_C_2600PDBCREDO0.7960.0260.5390.006
Rv2584c.122ito_IRE_A_2020PDBCREDO0.6230.1530.5380.006
Rv2584c.1111jlb_NVP_A_999PDBCREDO0.5620.2270.5370.006
Rv2584c.122w8y_NDR_B_1000PDBCREDO0.6720.1040.5370.006
Rv2584c.111uob_PNN_A_1311PDBCREDO0.5690.2180.5370.006
Rv2584c.121ya3_STR_B_2001PDBCREDO0.5560.2360.5370.006
Rv2584c.113k5v_STI_A_2PDBCREDO0.5840.1990.5360.006
Rv2584c.122prg_BRL_B_2PDBCREDO0.5340.2660.5340.006
Rv2584c.111opj_STI_B_4PDBCREDO0.5980.1810.5340.006
Rv2584c.123rif_IVM_A_403PDBCREDO0.5530.2400.5330.007
Rv2584c.123ri5_IVM_C_350PDBCREDO0.5520.2410.5330.007
Rv2584c.123rif_IVM_A_402PDBCREDO0.5520.2410.5330.007
Rv2584c.111kij_NOV_A_400PDBCREDO0.7290.0600.5320.007
Rv2584c.122uxo_TAC_B_1211PDBCREDO0.6930.0860.5320.007
Rv2584c.123rif_IVM_D_402PDBCREDO0.5510.2420.5320.007
Rv2584c.123ria_IVM_C_349PDBCREDO0.5510.2430.5310.007
Rv2584c.1111pbc_BHA_A_396PDBCREDO0.5550.2370.5300.007
Rv2584c.123rif_IVM_B_403PDBCREDO0.5490.2450.5300.007
Rv2584c.123v5w_8PR_A_701PDBCREDO0.6280.1470.5300.007
Rv2584c.1112bxp_P1Z_A_3001PDBCREDO0.5550.2370.5300.007
Rv2584c.111opj_STI_A_3PDBCREDO0.5930.1880.5290.007
Rv2584c.113cs9_NIL_A_600PDBCREDO0.5930.1880.5290.007
Rv2584c.123ln1_CEL_D_682PDBCREDO0.5670.2210.5290.007
Rv2584c.121d4s_TPV_A_201PDBCREDO0.5860.1960.5290.007
Rv2584c.112oiq_STI_A_1001PDBCREDO0.5600.2300.5280.007
Rv2584c.122zva_1N1_A_513PDBCREDO0.6600.1140.5280.007
Rv2584c.121a28_STR_B_2PDBCREDO0.6440.1300.5260.007
Rv2584c.113nxu_RIT_A_600PDBCREDO0.6060.1720.5260.007
Rv2584c.123h52_486_A_3PDBCREDO0.7060.0760.5250.007
Rv2584c.122h42_VIA_A_901PDBCREDO0.5630.2270.5250.007
Rv2584c.123gcs_BAX_A_401PDBCREDO0.7470.0490.5240.008
Rv2584c.123spk_TPV_B_100PDBCREDO0.7690.0380.5230.008
Rv2584c.122h42_VIA_C_903PDBCREDO0.5410.2570.5220.008
Rv2584c.113d91_REM_A_350PDBCREDO0.5370.2630.5210.008
Rv2584c.122y6o_1N1_A_1892PDBCREDO0.6380.1370.5210.008
Rv2584c.1112uxp_CLM_A_1211PDBCREDO0.5210.2860.5210.008
Rv2584c.123jwq_VIA_D_901PDBCREDO0.5580.2330.5210.008
Rv2584c.123g5d_1N1_B_1PDBCREDO0.6270.1490.5210.008
Rv2584c.121ya3_STR_C_3001PDBCREDO0.5590.2320.5200.008
Rv2584c.123qlg_1N1_A_601PDBCREDO0.6260.1490.5200.008
Rv2584c.113cs9_NIL_B_600PDBCREDO0.5980.1810.5190.008
Rv2584c.113nxu_RIT_B_600PDBCREDO0.5980.1810.5190.008
Rv2584c.121mx1_THA_A_1PDBCREDO0.7350.0570.5190.008
Rv2584c.112pl0_STI_A_200PDBCREDO0.5510.2430.5190.008
Rv2584c.123g5d_1N1_A_1PDBCREDO0.6240.1520.5180.008
Rv2584c.123qlg_1N1_B_601PDBCREDO0.6210.1540.5160.009
Rv2584c.123ads_IMN_B_3PDBCREDO0.7600.0420.5150.009
Rv2584c.113d91_REM_B_350PDBCREDO0.5300.2720.5150.009
Rv2584c.121sa1_POD_D_701PDBCREDO0.7120.0720.5140.009
Rv2584c.133kp6_SAL_A_3002PDBCREDO0.5890.1930.5140.009
Rv2584c.123e22_LOC_B_700PDBCREDO0.6490.1250.5140.009
Rv2584c.123kw2_ADN_B_300PDBCREDO0.6420.1320.5130.009
Rv2584c.113cs9_NIL_C_600PDBCREDO0.6230.1530.5130.009
Rv2584c.113cs9_NIL_D_600PDBCREDO0.6230.1530.5130.009
Rv2584c.121lhu_EST_A_301PDBCREDO0.5130.2990.5130.009
Rv2584c.123sxr_1N1_A_1PDBCREDO0.6420.1330.5130.009
Rv2584c.123e22_LOC_D_700PDBCREDO0.6470.1280.5120.009
Rv2584c.121y0x_T44_X_500PDBCREDO0.6880.0900.5120.009
Rv2584c.123oez_STI_B_601PDBCREDO0.6450.1290.5110.009
Rv2584c.113oez_STI_B_601PDBCREDO0.5940.1870.5100.009
Rv2584c.124asd_BAX_A_1500PDBCREDO0.7280.0610.5100.009
Rv2584c.123jwq_VIA_B_901PDBCREDO0.5290.2750.5100.009
Rv2584c.112x9g_LYA_A_1270PDBCREDO0.6120.1640.5100.009
Rv2584c.122cbr_A80_A_201PDBCREDO0.5680.2190.5090.009
Rv2584c.122qxs_RAL_A_600PDBCREDO0.8620.0080.5090.009
Rv2584c.111z2b_VLB_C_800PDBCREDO0.5400.2590.5090.010
Rv2584c.113ua1_08Y_A_600PDBCREDO0.6110.1660.5090.010
Rv2584c.122qxs_RAL_B_600PDBCREDO0.8600.0080.5080.010
Rv2584c.122fum_MIX_B_1539PDBCREDO0.6620.1130.5080.010
Rv2584c.121fm6_BRL_X_504PDBCREDO0.6220.1540.5080.010
Rv2584c.112jfa_RAL_A_600PDBCREDO0.5910.1900.5080.010
Rv2584c.122w8y_486_A_1000PDBCREDO0.7240.0630.5070.010
Rv2584c.122oiq_STI_A_1001PDBCREDO0.7020.0790.5070.010
Rv2584c.123d90_NOG_A_1001PDBCREDO0.5610.2280.5060.010
Rv2584c.123d90_NOG_B_2001PDBCREDO0.5600.2300.5050.010
Rv2584c.1113f8w_ADN_A_300PDBCREDO0.5040.3120.5040.010
Rv2584c.111err_RAL_B_600PDBCREDO0.5680.2190.5040.010
Rv2584c.113tne_RIT_A_401PDBCREDO0.5860.1960.5040.010
Rv2584c.113tne_RIT_B_401PDBCREDO0.5860.1960.5040.010
Rv2584c.123h52_486_D_2PDBCREDO0.6760.1000.5030.010
Rv2584c.121sa1_POD_B_700PDBCREDO0.7170.0680.5030.010
Rv2584c.1113f8w_ADN_B_301PDBCREDO0.5020.3150.5020.011
Rv2584c.122pl0_STI_A_200PDBCREDO0.6950.0850.5020.011
Rv2584c.113heg_BAX_A_1PDBCREDO0.5320.2700.5010.011
Rv2584c.1112x7h_PFN_A_1372PDBCREDO0.5250.2800.5010.011
Rv2584c.1114dt8_ADN_A_401PDBCREDO0.5240.2810.5010.011
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
Chemical NameConfidence scoreMolecular Weight
phosphoribosylpyrophosphatePubChem0.993390.07
adeninePubChem0.993135.127
adenosine monophosphatePubChem0.985347.221
guaninePubChem0.972151.126
phosphatePubChem0.97196.9872
D-ribose 5-phosphatePubChem0.965230.11
guanylatePubChem0.954363.221
pyrophosphatePubChem0.945177.975
deoxyadenosinePubChem0.937251.242
hydroxyl radicalsPubChem0.917.0073
adenine-desoxyribosidePubChem0.9251.242
aminoimidazole carboxamide ribonucleotidePubChem0.9338.211
2-deoxy-alpha-D-ribose 1-phosphatePubChem0.9214.11
5-aminoimidazole-4-carboxamide ribosidePubChem0.9338.211
deoxyribose-1-phosphatePubChem0.9214.11
theophyllinePubChem0.803180.164
magnesiumPubChem0.78524.305
2,6-diaminopurinePubChem0.767240.219
hypoxanthinePubChem0.762136.111
8-azaguaninePubChem0.754152.114
isoproterenolPubChem0.745211.258
prostaglandin E1PubChem0.734354.481
inosine monophosphatePubChem0.706348.206