Rv2241

Tuberculist information
Gene nameaceE
Protein functionPyruvate dehydrogenase E1 component AceE (pyruvate decarboxylase) (pyruvate dehydrogenase) (pyruvic dehydrogenase)
Functional category(tuberculist)intermediary metabolism and respiration
Gene location(kb)2512.54
Molecular mass(da)100185
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 901
	  		  	1    VASYLPDIDPEETSEWLESFDTLLQRCGPSRARYLMLRLLERAGEQRVAIPALTSTDYVN   60
			  	61   TIPTELEPWFPGDEDVERRYRAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAALYEVGF  120
			  	121  NHFFRGKSHPGGGDQVFIQGHASPGIYARAFLEGRLTAEQLDGFRQEHSHVGGGLPSYPH  180
			  	181  PRLMPDFWEFPTVSMGLGPLNAIYQARFNHYLHDRGIKDTSDQHVWCFLGDGEMDEPESR  240
			  	241  GLAHVGALEGLDNLTFVINCNLQRLDGPVRGNGKIIQELESFFRGAGWNVIKVVWGREWD  300
			  	301  ALLHADRDGALVNLMNTTPDGDYQTYKANDGGYVRDHFFGRDPRTKALVENMSDQDIWNL  360
			  	361  KRGGHDYRKVYAAYRAAVDHKGQPTVILAKTIKGYALGKHFEGRNATHQMKKLTLEDLKE  420
			  	421  FRDTQRIPVSDAQLEENPYLPPYYHPGLNAPEIRYMLDRRRALGGFVPERRTKSKALTLP  480
			  	481  GRDIYAPLKKGSGHQEVATTMATVRTFKEVLRDKQIGPRIVPIIPDEARTFGMDSWFPSL  540
			  	541  KIYNRNGQLYTAVDADLMLAYKESEVGQILHEGINEAGSVGSFIAAGTSYATHNEPMIPI  600
			  	601  YIFYSMFGFQRTGDSFWAAADQMARGFVLGATAGRTTLTGEGLQHADGHSLLLAATNPAV  660
			  	661  VAYDPAFAYEIAYIVESGLARMCGENPENIFFYITVYNEPYVQPPEPENFDPEGVLRGIY  720
			  	721  RYHAATEQRTNKAQILASGVAMPAALRAAQMLAAEWDVAADVWSVTSWGELNRDGVAIET  780
			  	781  EKLRHPDRPAGVPYVTRALENARGPVIAVSDWMRAVPEQIRPWVPGTYLTLGTDGFGFSD  840
			  	841  TRPAARRYFNTDAESQVVAVLEALAGDGEIDPSVPVAAARQYRIDDVAAAPEQTTDPGPG  900
			  	901  A

Known structures in the PDB
No Known structures
1 91 181 271 361 451 541 631 721 811 901 Range: 77 to 310  |  Coverage: 25% Transketolase_N Range: 56 to 885  |  Coverage: 92% 1 Range: 1 to 234  |  Coverage: 25% 1 Range: 77 to 310  |  Coverage: 25% 2 Range: 351 to 584  |  Coverage: 25% 3
Number of amino acids : 901
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
Transketolase_NPF0045677-310
Mtb Structural Proteome models
Model Number1
Model nameRv2241
Template2G28    APDBCREDO
Template coverage57_877
Template Identity(%)54.1
Model coverage(%)92.0
Normalized DOPE score-0.92

Structure Models from Chopin
Model Number1
Profilec.36.1.10
Click for model details
zscore11.47
Residue begin1
Residue end234
Model Number2
Profilec.36.1.10
Click for model details
zscore11.47
Residue begin77
Residue end310
Model Number3
Profilec.36.1.10
Click for model details
zscore11.47
Residue begin351
Residue end584
Binding pockets
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv2241Gene nameConfidence Score
Rv2215dlaT0.998
Rv2215dlaT0.998
Rv2215dlaT0.998
Rv0462lpdC0.995
Rv0462lpdC0.995
Rv0462lpdC0.995
Rv2495cbkdC0.978
Rv2495cbkdC0.978
Rv2495cbkdC0.978
Rv1617pykA0.972
Rv1617pykA0.972
Rv3003cilvB10.957
Rv3003cilvB10.957
Rv3003cilvB10.957
Rv2332mez0.951
Rv2332mez0.951
Rv3002cilvN0.946
Rv3002cilvN0.946
Rv3470cilvB20.943
Rv3470cilvB20.943
Rv3470cilvB20.943
Rv2967cpca0.942
Rv2967cpca0.942
Rv2967cpca0.942
Rv2967cpca0.942
Rv2967cpca0.942
Rv2967cpca0.942
Rv0694lldD10.937
Rv1449ctkt0.936
Rv1449ctkt0.936
Rv1449ctkt0.936
Rv1248cRv1248c0.935
Rv1248cRv1248c0.935
Rv1248cRv1248c0.935
Rv3303clpdA0.931
Rv3303clpdA0.931
Rv3303clpdA0.931
Rv2497cbkdA0.926
Rv1872clldD20.923
Rv0794cRv0794c0.913
Rv0794cRv0794c0.913
Rv0794cRv0794c0.913
Rv3509cilvX0.904
Rv3509cilvX0.904
Rv2496cbkdB0.903
Rv2496cbkdB0.903
Rv1820ilvG0.902
Rv1820ilvG0.902
Rv1820ilvG0.902
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
Chemical NameConfidence scoreMolecular Weight
acetyl-CoAPubChem0.961809.571
reduced nicotinamide adenine dinucleotidePubChem0.916665.441
carbon dioxidePubChem0.91444.0095
NAD+PubChem0.909663.425
lipoamidePubChem0.9205.341
adenosine diphosphatePubChem0.9427.201
dihydronicotinamide formycin dinucleotidePubChem0.9665.441
pyruvic acidPubChem0.988.0621
protiumPubChem0.92.01576
deuteriumPubChem0.92.01588
DL-lipoamidePubChem0.9205.341
acetyl coenzyme-APubChem0.9809.571
C05125PubChem0.9469.367
H(+)PubChem0.92.01588
adenosine triphosphatePubChem0.9507.181
phosphoenolpyruvatePubChem0.9168.042
Co-APubChem0.9767.534
coenzyme APubChem0.9767.534
6-S-acetyldihydrolipoamidePubChem0.9249.393
thiamine pyrophosphatePubChem0.8425.314
dihydrolipoamidePubChem0.739207.357
magnesiumPubChem0.71324.305
HEPESPubChem0.702238.305
hydron diphosphatePubChem0.702391.981
nchembio788-comp8PubChem0.702560.35
phosphatePubChem0.70296.9872
TdkPubChem0.702563.373