Rv0017c

Tuberculist information
Gene namerodA
Protein functionProbable cell division protein RodA
Functional category(tuberculist)cell wall and cell processes
Gene location(kb)20.231
Molecular mass(da)50610.8
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 469
	  		  	1    MTTRLQAPVAVTPPLPTRRNAELLLLCFAAVITFAALLVVQANQDQGVPWDLTSYGLAFL   60
			  	61   TLFGSAHLAIRRFAPYTDPLLLPVVALLNGLGLVMIHRLDLVDNEIGEHRHPSANQQMLW  120
			  	121  TLVGVAAFALVVTFLKDHRQLARYGYICGLAGLVFLAVPALLPAALSEQNGAKIWIRLPG  180
			  	181  FSIQPAEFSKILLLIFFSAVLVAKRGLFTSAGKHLLGMTLPRPRDLAPLLAAWVISVGVM  240
			  	241  VFEKDLGASLLLYTSFLVVVYLATQRFSWVVIGLTLFAAGTLVAYFIFEHVRLRVQTWLD  300
			  	301  PFADPDGTGYQIVQSLFSFATGGIFGTGLGNGQPDTVPAASTDFIIAAFGEELGLVGLTA  360
			  	361  ILMLYTIVIIRGLRTAIATRDSFGKLLAAGLSSTLAIQLFIVVGGVTRLIPLTGLTTPWM  420
			  	421  SYGGSSLLANYILLAILARISHGARRPLRTRPRNKSPITAAGTEVIERV

Known structures in the PDB
No Known structures
1 47 93 139 185 231 277 323 369 415 461 Range: 79 to 446  |  Coverage: 78% FTSW_RODA_SPOVE Range: 34 to 410  |  Coverage: 80% 1
Number of amino acids : 469
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
FTSW_RODA_SPOVEPF0109879-446
Mtb Structural Proteome models
Model Number1
Model nameRv0017c
Template1M56    APDBCREDO
Template coverage17_433
Template Identity(%)14.6
Model coverage(%)80.2
Normalized DOPE score1.68

Structure Models from Chopin
CHOPIN models not available for this query
Binding pockets
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv0017cGene nameConfidence Score
Rv0016cpbpA0.999
Rv2155cmurD0.997
Rv2158cmurE0.997
Rv2155cmurD0.997
Rv2158cmurE0.997
Rv2158cmurE0.997
Rv2153cmurG0.997
Rv2153cmurG0.997
Rv2150cftsZ0.994
Rv2150cftsZ0.994
Rv2163cpbpB0.988
Rv2163cpbpB0.988
Rv2157cmurF0.984
Rv2157cmurF0.984
Rv2157cmurF0.984
Rv0018cpstP0.983
Rv0014cpknB0.982
Rv0014cpknB0.982
Rv2165cRv2165c0.981
Rv0015cpknA0.978
Rv2981cddlA0.976
Rv2981cddlA0.976
Rv2156cmurX0.972
Rv2156cmurX0.972
Rv2152cmurC0.969
Rv2152cmurC0.969
Rv2152cmurC0.969
Rv2748cftsK0.967
Rv2748cftsK0.967
Rv2748cftsK0.967
Rv2166cRv2166c0.955
Rv0482murB0.952
Rv0482murB0.952
Rv1315murA0.935
Rv0019cfhaB0.912
Rv2151cftsQ0.902
Rv2151cftsQ0.902
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
No high confidence interactions