Rv1309

Tuberculist information
Gene nameatpG
Protein functionProbable ATP synthase gamma chain AtpG
Functional category(tuberculist)intermediary metabolism and respiration
Gene location(kb)1464.88
Molecular mass(da)33890.4
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 305
	  		  	1    MAATLRELRGRIRSAGSIKKITKAQELIATSRIARAQARLESARPYAFEITRMLTTLAAE   60
			  	61   AALDHPLLVERPEPKRAGVLVVSSDRGLCGAYNANIFRRSEELFSLLREAGKQPVLYVVG  120
			  	121  RKAQNYYSFRNWNITESWMGFSEQPTYENAAEIASTLVDAFLLGTDNGEDQRSDSGEGVD  180
			  	181  ELHIVYTEFKSMLSQSAEAHRIAPMVVEYVEEDIGPRTLYSFEPDATMLFESLLPRYLTT  240
			  	241  RVYAALLESAASELASRQRAMKSATDNADDLIKALTLMANRERQAQITQEISEIVGGANA  300
			  	301  LAEAR

Known structures in the PDB
No Known structures
1 31 61 91 121 151 181 211 241 271 301 Range: 3 to 301  |  Coverage: 97% ATP-synt Range: 3 to 301  |  Coverage: 97% 1 Range: 28 to 260  |  Coverage: 76% 1 Range: 179 to 302  |  Coverage: 40% 2
Number of amino acids : 305
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
ATP-syntPF002313-301
Mtb Structural Proteome models
Model Number1
Model nameRv1309
Template1H8E    GPDBCREDO
Template coverage1_272
Template Identity(%)36.1
Model coverage(%)97.7
Normalized DOPE score0.634

Structure Models from Chopin
Model Number1
Profile3.40.1380.10
Click for model details
zscore33.35
Residue begin28
Residue end260
Model Number2
Profilec.49.2.1 - 1.10.287.80
Click for model details
zscore27.74
Residue begin179
Residue end302
Binding pockets
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv1309Gene nameConfidence Score
Rv1310atpD0.999
Rv1306atpF0.999
Rv1310atpD0.999
Rv1310atpD0.999
Rv1311atpC0.999
Rv1308atpA0.999
Rv1308atpA0.999
Rv1304atpB0.999
Rv1308atpA0.999
Rv1305atpE0.998
Rv1307atpH0.998
Rv1307atpH0.998
Rv0733adk0.985
Rv0952sucD0.946
Rv0952sucD0.946
Rv3628ppa0.943
Rv3148nuoD0.938
Rv1023eno0.935
Rv1023eno0.935
Rv0685tuf0.929
Rv0685tuf0.929
Rv0685tuf0.929
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
Chemical NameConfidence scoreMolecular Weight
phosphatePubChem0.97296.9872
adenosine diphosphatePubChem0.972427.201
adenosine triphosphatePubChem0.972507.181
H(+)PubChem0.9462.01588
deuteriumPubChem0.9432.01588
protiumPubChem0.92.01576
hydroxyl radicalsPubChem0.917.0073
adenosine monophosphatePubChem0.9347.221
deoxyadenosine triphosphatePubChem0.9491.182
magnesiumPubChem0.73524.305
hydron diphosphatePubChem0.735391.981
AMPPNPPubChem0.735506.196