Rv1306

Tuberculist information
Gene nameatpF
Protein functionProbable ATP synthase B chain AtpF
Functional category(tuberculist)intermediary metabolism and respiration
Gene location(kb)1461.32
Molecular mass(da)18324.8
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 171
	  		  	1    MGEVSAIVLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVIGTFVVPPILKVLRER   60
			  	61   DAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQASSLRDNARADGRKVIEDARVRAEQ  120
			  	121  QVASTLQTAHEQLKRERDAVELDLRAHVGTMSATLASRILGVDLTASAATR

Known structures in the PDB
No Known structures
1 18 35 52 69 86 103 120 137 154 171 Range: 30 to 161  |  Coverage: 76% ATP-synt_B Range: 86 to 146  |  Coverage: 35% 1
Number of amino acids : 171
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
ATP-synt_BPF0043030-161
Mtb Structural Proteome models
Structure models not available for this query
Structure Models from Chopin
Model Number1
Profilef.23.21.1 - 1.20.5.620
Click for model details
zscore9.56
Residue begin86
Residue end146
Binding pockets
Structure models not available for this query
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv1306Gene nameConfidence Score
Rv1308atpA0.999
Rv1311atpC0.999
Rv1308atpA0.999
Rv1308atpA0.999
Rv1304atpB0.999
Rv1309atpG0.999
Rv1310atpD0.999
Rv1310atpD0.999
Rv1310atpD0.999
Rv1305atpE0.998
Rv1307atpH0.99
Rv1307atpH0.99
Rv0733adk0.928
Rv3628ppa0.921
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
Chemical NameConfidence scoreMolecular Weight
H(+)PubChem0.9052.01588
deuteriumPubChem0.9052.01588
adenosine triphosphatePubChem0.904507.181
phosphatePubChem0.996.9872
protiumPubChem0.92.01576
adenosine monophosphatePubChem0.9347.221
deoxyadenosine triphosphatePubChem0.9491.182
hydroxyl radicalsPubChem0.917.0073
adenosine diphosphatePubChem0.9427.201