Rv3382c

Tuberculist information
Gene namelytB1
Protein functionProbable LYTB-related protein LytB1
Functional category(tuberculist)cell wall and cell processes
Gene location(kb)3796.45
Molecular mass(da)34666.3
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 329
	  		  	1    MAEVFVGPVAQGYASGEVTVLLASPRSFCAGVERAIETVKRVLDVAEGPVYVRKQIVHNT   60
			  	61   VVVAELRDRGAVFVEDLDEIPDPPPPGAVVVFSAHGVSPAVRAGADERGLQVVDATCPLV  120
			  	121  AKVHAEAARFAARGDTVVFIGHAGHEETEGTLGVAPRSTLLVQTPADVAALNLPEGTQLS  180
			  	181  YLTQTTLALDETADVIDALRARFPTLGQPPSEDICYATTNRQRALQSMVGECDVVLVIGS  240
			  	241  CNSSNSRRLVELAQRSGTPAYLIDGPDDIEPEWLSSVSTIGVTAGASAPPRLVGQVIDAL  300
			  	301  RGYASITVVERSIATETVRFGLPKQVRAQ

Known structures in the PDB
No Known structures
1 33 65 97 129 161 193 225 257 289 321 Range: 20 to 303  |  Coverage: 86% LYTB Range: 1 to 329  |  Coverage: 99% 1
Number of amino acids : 329
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
LYTBPF0240120-303
Mtb Structural Proteome models
Structure models not available for this query
Structure Models from Chopin
Model Number1
Profilec.1.9.12 - 3.20.20.140
Click for model details
zscore4.9
Residue begin1
Residue end329
Binding pockets
Structure models not available for this query
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv3382cGene nameConfidence Score
Rv3383cidsB0.998
Rv2868cgcpE0.997
Rv2870cdxr0.98
Rv2870cdxr0.98
Rv2870cdxr0.98
Rv3581cispF0.966
Rv3379cdxs20.947
Rv3379cdxs20.947
Rv3379cdxs20.947
Rv3398cidsA10.929
Rv1745cidi0.929
Rv1086Rv10860.924
Rv1630rpsA0.919
Rv2173idsA20.914
Rv3582cispD0.906
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
Chemical NameConfidence scoreMolecular Weight
dimethylallyl diphosphatePubChem0.965246.092
isopentenyl diphosphatePubChem0.964246.092
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphatePubChem0.942262.091