Rv2838c

Tuberculist information
Gene namerbfA
Protein functionProbable ribosome-binding factor a RbfA (P15B protein)
Functional category(tuberculist)information pathways
Gene location(kb)3144.62
Molecular mass(da)18998.3
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 183
	  		  	1    MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH   60
			  	61   DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD  120
			  	121  ADLARVRVGAKPAGEADPYRDNGSVAQSPAPGGLGIRTSDGPEAVEAPLTCGGDTGDDDR  180
			  	181  PKE

Known structures in the PDB
No Known structures
1 19 37 55 73 91 109 127 145 163 181 Range: 6 to 113  |  Coverage: 58% RBFA Range: 3 to 108  |  Coverage: 57% 1 Range: 1 to 110  |  Coverage: 59% 1
Number of amino acids : 183
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
RBFAPF020336-113
Mtb Structural Proteome models
Model Number1
Model nameRv2838c
Template1KKG    APDBCREDO
Template coverage4_108
Template Identity(%)30.5
Model coverage(%)57.1
Normalized DOPE score-0.095

Structure Models from Chopin
Model Number1
Profiled.52.7.1 - 3.30.300.20
Click for model details
zscore23.94
Residue begin1
Residue end110
Binding pockets
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv2838cGene nameConfidence Score
Rv2839cinfB0.998
Rv2839cinfB0.998
Rv2839cinfB0.998
Rv2839cinfB0.998
Rv2837cRv2837c0.971
Rv2837cRv2837c0.971
Rv2793ctruB0.957
Rv2793ctruB0.957
Rv2785crpsO0.948
Rv2783cgpsI0.946
Rv2783cgpsI0.946
Rv2783cgpsI0.946
Rv2783cgpsI0.946
Rv2783cgpsI0.946
Rv2841cnusA0.934
Rv2841cnusA0.934
Rv2840cRv2840c0.902
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
No high confidence interactions