SInCRe - Rv1709

Tuberculist information

Gene name	scpA
Protein function	Possible segregation and condensation protein ScpA
Functional category(tuberculist)	cell wall and cell processes
Gene location(kb)	1937.31
Molecular mass(da)	30536.8
External sites	TB Database TubercuList WebTB

Protein sequence

Number of amino acids : 278

	  		  	1    VNGLQNSLANGGTAPENGYSAGFRVRLTNFEGPFDLLLQLIFAHQLDVTEVALHQVTDDF   60
			  	61   IAYTKAIGARLELEETTAFLVIAATLLDLKAARLLPAGQVDDEEDLALLEVRDLLFARLL  120
			  	121  QYRAFKHVAEMFAELEATALRSYPRAVSLEDGFVGLLPEVMLGVDAHRFAEIAAIALTPR  180
			  	181  PAPTVATEHLHELMVSVPEQAEHLLAMLKARGSGQWASFSELVADCTAPIEIVGRFLALL  240
			  	241  ELYRTRAVAFEQSEPLGALQVSWTGDDAERSDEKERRL

Known structures in the PDB

No Known structures

Number of amino acids : 278

Domains assigned based on sequence.

Mtb Structural proteome models

CHOPIN models

Profile-based domain assignment

Structural/Functional domain family	Pfam acc.no./SCOP ID	Domain Region
ScpA_ScpB	PF02616	40-264

Mtb Structural Proteome models

Structure models not available for this query

Structure Models from Chopin

CHOPIN models not available for this query

Binding pockets

Structure models not available for this query

STRING

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Protein interacting with Rv1709	Gene name	Confidence Score
Rv1710	scpB	0.999
Rv1711	Rv1711	0.986
Rv1711	Rv1711	0.986
Rv1712	cmk	0.986
Rv1713	engA	0.98
Rv1713	engA	0.98
Rv2922c	smc	0.937
Rv2922c	smc	0.937
Rv1708	Rv1708	0.91

Potential ligand/drug binding sites

No binding sites identified

Similarity to known drug target from sensitive sequence analysis

No drug targets

List of small molecules tested from TIBLE

Data not available

Off-target activity - ligand based from TIBLE

Data not available

Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.

Data not available

STITCH interactions

No high confidence interactions