Rv2055c

Tuberculist information
Gene namerpsR2
Protein function30S ribosomal protein S18 RpsR2
Functional category(tuberculist)information pathways
Gene location(kb)2314.09
Molecular mass(da)9696.24
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 88
	  		  	1    MAAKSARKGPTKAKKNLLDSLGVESVDYKDTATLRVFISDRGKIRSRGVTGLTVQQQRQV   60
			  	61   AQAIKNAREMALLPYPGQDRQRRAALCP

Known structures in the PDB
No Known structures
1 9 17 25 33 41 49 57 65 73 81 Range: 21 to 73  |  Coverage: 59% Ribosomal_S18 Range: 25 to 79  |  Coverage: 61% 1 Range: 10 to 82  |  Coverage: 81% 1
Number of amino acids : 88
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
Ribosomal_S18PF0108421-73
Mtb Structural Proteome models
Model Number1
Model nameRv2055c
Template2AVY    RPDBCREDO
Template coverage19_73
Template Identity(%)47.3
Model coverage(%)61.4
Normalized DOPE score-0.607

Structure Models from Chopin
Model Number1
Profilea.4.8.1 - 4.10.640.10
Click for model details
zscore18.58
Residue begin10
Residue end82
Binding pockets
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv2055cGene nameConfidence Score
Rv0053rpsF0.992
Rv2057crpmG10.991
Rv2058crpmB20.99
Rv2056crpsN20.983
Rv0634BrpmG20.973
Rv0056rplI0.959
Rv0056rplI0.959
Rv0054ssb0.931
Rv2442crplU0.926
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
No high confidence interactions