SInCRe - Rv3568c

Tuberculist information

Gene name	hsaC
Protein function	3,4-DHSA dioxygenase
Functional category(tuberculist)	intermediary metabolism and respiration
Gene location(kb)	4009.3
Molecular mass(da)	33582.3
External sites	TB Database TubercuList WebTB

Protein sequence

Number of amino acids : 300

	  		  	1    MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPEGALYLRMDDFPARLVVVPGEHDR   60
			  	61   LLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120
			  	121  TALEHRRVVSPYGHRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVG  180
			  	181  RPADGPPAWLRFFGCNPRHHSLAFLPMPTSSGIVHLMVEVEQADDVGLCLDRALRRKVPM  240
			  	241  SATLGRHVNDLMLSFYMKTPGGFDIEFGCEGRQVDDRDWIARESTAVSLWGHDFTVGARG  300

Known structures in the PDB

	PDB ID	2ZI8
	Total residue count	600
	Number of chains	2
	Method	X-RAY
	Resolution	2.2

	PDB ID	2ZYQ
	Total residue count	600
	Number of chains	2
	Method	X-RAY
	Resolution	2

Number of amino acids : 300

Domains assigned based on sequence.

Mtb Structural proteome models

CHOPIN models

Profile-based domain assignment

Structural/Functional domain family	Pfam acc.no./SCOP ID	Domain Region
Glyoxalase	PF00903	142-267

Mtb Structural Proteome models

Model Number	1
Model name	Rv3568c_2zyq_A
Template	2ZYQ APDB CREDO
Template coverage	2_297
Template Identity(%)	100.0
Model coverage(%)	98.0
Normalized DOPE score	-1.745

Model Number	2
Model name	Rv3568c
Template	1LGT APDB CREDO
Template coverage	2_288
Template Identity(%)	38.7
Model coverage(%)	97.3
Normalized DOPE score	-0.963

Structure Models from Chopin

Model Number	1
Profile	d.32.1.10 Click for model details
zscore	12.4
Residue begin	131
Residue end	297

Binding pockets

STRING

Cytoscape Web will replace the contents of this div with protein-protein interaction network.

Protein interacting with Rv3568c	Gene name	Confidence Score
Rv3569c	hsaD	0.995
Rv3570c	hsaA	0.989
Rv3570c	hsaA	0.989
Rv3567c	hsaB	0.972
Rv3566c	nat	0.911
Rv3552	Rv3552	0.903
Rv3566A	Rv3566A	0.902

Potential ligand/drug binding sites

No binding sites identified

Similarity to known drug target from sensitive sequence analysis

No drug targets

List of small molecules tested from TIBLE

Data not available

Off-target activity - ligand based from TIBLE

Data not available

Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.

Data not available

STITCH interactions

Chemical Name	Confidence score	Molecular Weight
3,4-DHSAPubChem	0.99	316.391
Fe(III)PubChem	0.949	55.845
tartratePubChem	0.9	150.087
d-tartratePubChem	0.9	150.087
2,3-dihydroxybiphenylPubChem	0.82	186.207
catecholPubChem	0.817	110.111
3-methylcatecholPubChem	0.811	124.137