Tuberculist information
Gene namefadE22
Protein functionProbable acyl-CoA dehydrogenase FadE22
Functional category(tuberculist)lipid metabolism
Gene location(kb)3423.26
Molecular mass(da)76741.1
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 721
	  		  	1    MGIALTDDHRELSGVARAFLTSQKVRWAARASLDAAGDARPPFWQNLAELGWLGLHIDER   60
			  	61   HGGSGYGLSELVVVIEELGRAVAPGLFVPTVIASAVVAKEGTDDQRARLLPALIDGTLTA  120
			  	121  GVGLDSQVQVTDGVADGEAGIVLGAGLAELLLVAAGDDVLVLERGRKGVSVDVPENFDPT  180
			  	181  RRSGRVRLDNVRVTTDDILLGAYESALARARTLLAAEAVGGAADCVDSAVAYAKVRQQFG  240
			  	241  RTIATFQAVKHHCANMLVAAESAIAAVWDAARAAAEDEEQFRLAAAVAAALAFPAYARNA  300
			  	301  ELNIQVHGGIGFTWEHDAHLHLRRALVTVGLFGGDAPVRDVFERTAAGVTRAISLDLPAQ  360
			  	361  AEELRARIRSDAAEIAALEKDAQRDKLIETGYVMPHWPRPWGRAAGAVEQLVIEEEFSAA  420
			  	421  GIERPDYSITGWVILTLIQHGTPWQIERFVEKALRQQEIWCQLFSEPDAGSDAASVKTRA  480
			  	481  TRVEGGWKINGQKVWTSGAQYCARGLATVRTDPDAPKHAGITTVIIDMLAPGVEVRPLRQ  540
			  	541  ITGDSEFNEVFFNDVFVPDEDVVGAPNSGWTVARATLGNERVSIGGSGSYYEAMAAKLVQ  600
			  	601  LVQRRSDAFAGAPIRVGAFLAEDHALRLLNLRRAARSVEGAGPGPEGNITKLKVAEHMIE  660
			  	661  GAAIAAALWGPEIALLDGPGRVIGRTVMGARGMAIAGGTSEVTRNQIAERILGMPRDPLI  720
			  	721  S
			  			

Known structures in the PDB
No Known structures
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
Acyl-CoA_dh_NPF027716-117
Acyl-CoA_dh_1PF00441201-341
Acyl-CoA_dh_NPF02771356-457
Acyl-CoA_dh_MPF02770461-512
Acyl-CoA_dh_1PF00441567-712
Mtb Structural Proteome models
Model Number1
Model nameRv3061c.1
Template1UKW    APDBCREDO
Template coverage32_405
Template Identity(%)28.2
Model coverage(%)47.6
Normalized DOPE score-0.231

Model Number2
Model nameRv3061c
Template3MDD    APDBCREDO
Template coverage13_392
Template Identity(%)26.7
Model coverage(%)49.8
Normalized DOPE score0.315

Model Number3
Model nameRv3061c.2
Template2DDH    APDBCREDO
Template coverage23_459
Template Identity(%)12.6
Model coverage(%)51.7
Normalized DOPE score1.119

Structure Models from Chopin
Model Number1
Profilee.6.1.1
Click for model details
zscore11.74
Residue begin461
Residue end512
Model Number2
Profilea.29.3.1, e.6.1.1 - 1.10.540.10, 1.20.140.10, 2.40.110.10
Click for model details
zscore9.46
Residue begin1
Residue end112
Model Number3
Profilea.29.3.1
Click for model details
zscore6.33
Residue begin201
Residue end341
Model Number4
Profilea.29.3.1
Click for model details
zscore6.33
Residue begin567
Residue end707
Model Number5
Profile1.10.540.10
Click for model details
zscore6.27
Residue begin1
Residue end112
Binding pockets
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv3061cGene nameConfidence Score
Rv3516echA190.913
Rv3774echA210.906
Rv0860fadB0.901
Rv0860fadB0.901
Rv0860fadB0.901
Potential ligand/drug binding sites
Protein ModelPocket NumberDrug Binding Site PMIN ScorePvalue PMINPMAX ScorePvalue PMAX
Rv3061c.132qxs_RAL_A_600PDBCREDO0.7460.0500.6870.000
Rv3061c.132qxs_RAL_B_600PDBCREDO0.7420.0520.6830.000
Rv3061c.133h52_486_A_3PDBCREDO0.7410.0530.6390.001
Rv3061c.231ya4_CTX_A_1PDBCREDO0.6600.1150.6290.001
Rv3061c.232qxs_RAL_A_600PDBCREDO0.8300.0150.6280.001
Rv3061c.232qxs_RAL_B_600PDBCREDO0.8290.0150.6270.001
Rv3061c.232nnk_ROC_A_401PDBCREDO0.6340.1410.6190.001
Rv3061c.233gp0_NIL_A_1PDBCREDO0.7520.0460.6170.002
Rv3061c.131ya4_CTX_A_1PDBCREDO0.8440.0120.6160.002
Rv3061c.133cs9_NIL_A_600PDBCREDO0.6520.1230.6160.002
Rv3061c.233ndt_ROC_D_100PDBCREDO0.6310.1440.6160.002
Rv3061c.133b0w_DGX_B_1PDBCREDO0.6310.1430.6140.002
Rv3061c.233k4v_ROC_D_201PDBCREDO0.6280.1470.6130.002
Rv3061c.133cs9_NIL_B_600PDBCREDO0.6590.1160.6060.002
Rv3061c.133h52_486_B_1PDBCREDO0.6790.0980.6040.002
Rv3061c.233ucb_017_A_201PDBCREDO0.6180.1580.6040.002
Rv3061c.233ogq_AB1_A_200PDBCREDO0.6960.0840.6010.002
Rv3061c.132w8y_486_A_1000PDBCREDO0.6550.1200.6000.002
Rv3061c.232avv_MK1_A_901PDBCREDO0.5960.1840.5960.002
Rv3061c.132jfa_RAL_B_600PDBCREDO0.7110.0730.5950.002
Rv3061c.233ufn_ROC_A_401PDBCREDO0.7250.0630.5940.002
Rv3061c.131err_RAL_A_600PDBCREDO0.7100.0730.5940.002
Rv3061c.233cs9_NIL_C_600PDBCREDO0.7440.0510.5940.002
Rv3061c.233ndu_ROC_D_100PDBCREDO0.6340.1410.5910.002
Rv3061c.233cs9_NIL_D_600PDBCREDO0.7410.0530.5910.002
Rv3061c.131err_RAL_B_600PDBCREDO0.7060.0760.5910.002
Rv3061c.133h52_486_D_2PDBCREDO0.6840.0940.5900.003
Rv3061c.232avv_MK1_E_902PDBCREDO0.5900.1920.5900.003
Rv3061c.232q64_1UN_B_1001PDBCREDO0.6490.1250.5890.003
Rv3061c.232pym_1UN_A_1001PDBCREDO0.6480.1260.5890.003
Rv3061c.233el4_ROC_A_100PDBCREDO0.5880.1940.5880.003
Rv3061c.232qak_1UN_A_1001PDBCREDO0.6470.1280.5870.003
Rv3061c.133ufn_ROC_A_401PDBCREDO0.6910.0880.5870.003
Rv3061c.232pyn_1UN_A_1001PDBCREDO0.6460.1280.5870.003
Rv3061c.131n49_RIT_D_401PDBCREDO0.6020.1760.5860.003
Rv3061c.232q63_1UN_A_1001PDBCREDO0.6420.1330.5820.003
Rv3061c.131y0x_T44_X_500PDBCREDO0.6740.1020.5810.003
Rv3061c.232f80_017_B_301PDBCREDO0.6390.1350.5800.003
Rv3061c.231k6c_MK1_B_902PDBCREDO0.5790.2050.5790.003
Rv3061c.231xkk_FMM_A_91PDBCREDO0.6880.0900.5790.003
Rv3061c.231rl8_RIT_A_9001PDBCREDO0.6220.1540.5780.003
Rv3061c.232nmy_ROC_A_401PDBCREDO0.6330.1410.5770.003
Rv3061c.231t7i_017_A_200PDBCREDO0.5770.2070.5770.003
Rv3061c.233cs9_NIL_B_600PDBCREDO0.7620.0410.5770.003
Rv3061c.232xkw_P1B_A_1478PDBCREDO0.6660.1100.5750.003
Rv3061c.133heg_BAX_A_1PDBCREDO0.6450.1300.5730.003
Rv3061c.233pwr_ROC_A_401PDBCREDO0.6000.1790.5720.003
Rv3061c.132hw2_RFP_A_1200PDBCREDO0.7050.0770.5720.003
Rv3061c.133el0_1UN_A_201PDBCREDO0.5880.1940.5720.003
Rv3061c.131skx_RFP_A_1PDBCREDO0.6210.1550.5710.004
Rv3061c.132aoj_FRD_C_305PDBCREDO0.6030.1760.5690.004
Rv3061c.233oxc_ROC_A_401PDBCREDO0.6810.0960.5680.004
Rv3061c.233bvb_017_B_401PDBCREDO0.5960.1840.5680.004
Rv3061c.233cs9_NIL_A_600PDBCREDO0.7720.0370.5680.004
Rv3061c.233sm2_478_A_126PDBCREDO0.6410.1330.5680.004
Rv3061c.133cs9_NIL_C_600PDBCREDO0.6490.1250.5660.004
Rv3061c.133gp0_NIL_A_1PDBCREDO0.6640.1110.5640.004
Rv3061c.233d1y_ROC_A_201PDBCREDO0.6060.1720.5640.004
Rv3061c.231c6z_ROC_B_505PDBCREDO0.6210.1550.5640.004
Rv3061c.231hxb_ROC_A_100PDBCREDO0.6210.1550.5640.004
Rv3061c.232nnp_ROC_A_401PDBCREDO0.5640.2250.5640.004
Rv3061c.133cs9_NIL_D_600PDBCREDO0.6450.1290.5630.004
Rv3061c.233cyx_ROC_A_201PDBCREDO0.6030.1760.5620.004
Rv3061c.231sdt_MK1_B_902PDBCREDO0.5890.1920.5620.004
Rv3061c.233tkg_ROC_C_901PDBCREDO0.5880.1930.5610.004
Rv3061c.133vn2_TLS_A_501PDBCREDO0.6700.1060.5610.004
Rv3061c.233oxx_DR7_C_100PDBCREDO0.6000.1780.5590.004
Rv3061c.232o4k_DR7_A_301PDBCREDO0.5850.1980.5580.004
Rv3061c.133lzv_017_A_200PDBCREDO0.5720.2140.5560.005
Rv3061c.131xzx_T3_X_500PDBCREDO0.7070.0750.5560.005
Rv3061c.133uvv_T3_A_501PDBCREDO0.7070.0750.5560.005
Rv3061c.231t46_STI_A_3PDBCREDO0.6950.0840.5550.005
Rv3061c.133kk6_CEL_B_1701PDBCREDO0.6030.1750.5550.005
Rv3061c.133ogp_017_B_200PDBCREDO0.5700.2170.5540.005
Rv3061c.131fm6_BRL_X_504PDBCREDO0.7050.0770.5540.005
Rv3061c.132oax_SNL_F_6001PDBCREDO0.6210.1540.5530.005
Rv3061c.131n49_RIT_B_301PDBCREDO0.5840.1980.5530.005
Rv3061c.132aoh_FRD_C_305PDBCREDO0.6200.1560.5520.005
Rv3061c.131opj_STI_A_3PDBCREDO0.5830.2000.5510.005
Rv3061c.131a28_STR_B_2PDBCREDO0.7010.0800.5510.005
Rv3061c.132oax_SNL_D_4001PDBCREDO0.6200.1560.5510.005
Rv3061c.232aqu_DR7_B_300PDBCREDO0.6220.1530.5510.005
Rv3061c.132oax_SNL_E_5001PDBCREDO0.6190.1570.5510.005
Rv3061c.131opj_STI_B_4PDBCREDO0.5810.2020.5500.005
Rv3061c.132oax_SNL_A_1001PDBCREDO0.6170.1590.5490.005
Rv3061c.132jfa_RAL_A_600PDBCREDO0.6760.1000.5480.005
Rv3061c.133gcs_BAX_A_401PDBCREDO0.5980.1810.5480.005
Rv3061c.233oxx_DR7_A_100PDBCREDO0.6190.1570.5480.005
Rv3061c.133s56_ROC_A_201PDBCREDO0.6100.1670.5460.005
Rv3061c.131bsx_T3_A_1PDBCREDO0.7180.0680.5460.005
Rv3061c.131bsx_T3_B_2PDBCREDO0.7180.0680.5460.005
Rv3061c.133b0w_DGX_A_1PDBCREDO0.5940.1870.5440.006
Rv3061c.231opj_STI_B_4PDBCREDO0.7390.0540.5440.006
Rv3061c.132oiq_STI_A_1001PDBCREDO0.6100.1670.5430.006
Rv3061c.231hxw_RIT_B_301PDBCREDO0.6450.1290.5430.006
Rv3061c.133oez_STI_A_601PDBCREDO0.5580.2330.5420.006
Rv3061c.133gws_T3_X_500PDBCREDO0.7100.0730.5400.006
Rv3061c.233k4v_ROC_B_201PDBCREDO0.6890.0890.5400.006
Rv3061c.231hsh_MK1_A_401PDBCREDO0.6940.0860.5390.006
Rv3061c.233s56_ROC_A_201PDBCREDO0.6930.0860.5390.006
Rv3061c.232hs2_017_A_201PDBCREDO0.5520.2420.5390.006
Rv3061c.132o4p_TPV_A_300PDBCREDO0.5700.2170.5380.006
Rv3061c.231opj_STI_A_3PDBCREDO0.7310.0590.5380.006
Rv3061c.233d1z_017_B_201PDBCREDO0.5500.2440.5370.006
Rv3061c.133spk_TPV_B_100PDBCREDO0.5690.2190.5370.006
Rv3061c.233ndt_ROC_A_101PDBCREDO0.6990.0820.5360.006
Rv3061c.233em4_DR7_V_100PDBCREDO0.6350.1400.5340.006
Rv3061c.132pl0_STI_A_200PDBCREDO0.6000.1790.5340.007
Rv3061c.131uwj_BAX_A_1723PDBCREDO0.5330.2680.5330.007
Rv3061c.232fxe_DR7_A_102PDBCREDO0.6340.1410.5330.007
Rv3061c.231n49_RIT_B_301PDBCREDO0.7240.0640.5330.007
Rv3061c.132xkw_P1B_A_1478PDBCREDO0.6600.1140.5330.007
Rv3061c.133sm2_478_A_126PDBCREDO0.6770.0990.5330.007
Rv3061c.233eky_DR7_A_100PDBCREDO0.6330.1420.5320.007
Rv3061c.232r5p_MK1_D_902PDBCREDO0.6330.1420.5320.007
Rv3061c.232r5p_MK1_B_902PDBCREDO0.6320.1420.5320.007
Rv3061c.233ndw_RIT_A_100PDBCREDO0.5710.2160.5310.007
Rv3061c.133ogp_017_A_200PDBCREDO0.5960.1840.5300.007
Rv3061c.131zgy_BRL_A_503PDBCREDO0.7440.0510.5300.007
Rv3061c.233tkg_ROC_B_801PDBCREDO0.6620.1130.5290.007
Rv3061c.232ieo_017_A_402PDBCREDO0.5410.2560.5290.007
Rv3061c.131qkn_RAL_A_600PDBCREDO0.6950.0850.5290.007
Rv3061c.134asd_BAX_A_1500PDBCREDO0.5770.2080.5290.007
Rv3061c.233ndx_RIT_A_100PDBCREDO0.5280.2760.5280.007
Rv3061c.133k5v_STI_A_2PDBCREDO0.5420.2550.5270.007
Rv3061c.232avo_MK1_B_902PDBCREDO0.5800.2040.5260.007
Rv3061c.233jw2_017_A_401PDBCREDO0.5380.2600.5260.007
Rv3061c.133pyy_STI_B_4PDBCREDO0.5400.2580.5250.007
Rv3061c.132hyy_STI_A_600PDBCREDO0.5400.2580.5250.007
Rv3061c.133mss_STI_B_1PDBCREDO0.5400.2590.5240.008
Rv3061c.132hyy_STI_D_600PDBCREDO0.5390.2590.5240.008
Rv3061c.133mss_STI_D_1PDBCREDO0.5390.2590.5240.008
Rv3061c.131iep_STI_A_201PDBCREDO0.5390.2600.5240.008
Rv3061c.131iep_STI_B_202PDBCREDO0.5380.2610.5230.008
Rv3061c.132hyy_STI_C_600PDBCREDO0.5380.2610.5230.008
Rv3061c.133ms9_STI_B_1PDBCREDO0.5380.2610.5230.008
Rv3061c.133pyy_STI_A_3PDBCREDO0.5380.2610.5230.008
Rv3061c.233el0_1UN_A_201PDBCREDO0.7300.0590.5230.008
Rv3061c.131xkk_FMM_A_91PDBCREDO0.6320.1430.5230.008
Rv3061c.133mss_STI_C_1PDBCREDO0.5370.2620.5220.008
Rv3061c.133h0a_9RA_A_500PDBCREDO0.7580.0430.5220.008
Rv3061c.233tl9_ROC_A_401PDBCREDO0.5990.1810.5220.008
Rv3061c.133k5v_STI_B_2PDBCREDO0.5370.2630.5220.008
Rv3061c.133mss_STI_A_1PDBCREDO0.5370.2630.5220.008
Rv3061c.133ms9_STI_A_1PDBCREDO0.5350.2650.5200.008
Rv3061c.133gvu_STI_A_1001PDBCREDO0.5350.2660.5200.008
Rv3061c.233ekw_DR7_B_100PDBCREDO0.6020.1770.5190.008
Rv3061c.233ekx_1UN_B_201PDBCREDO0.6020.1770.5190.008
Rv3061c.232fxd_DR7_A_102PDBCREDO0.6670.1080.5190.008
Rv3061c.133rgf_BAX_A_465PDBCREDO0.5180.2910.5180.008
Rv3061c.132h77_T3_A_1PDBCREDO0.7260.0620.5170.008
Rv3061c.232avs_MK1_B_902PDBCREDO0.5700.2170.5170.008
Rv3061c.133mno_DEX_A_784PDBCREDO0.6170.1590.5160.009
Rv3061c.233lzv_017_A_200PDBCREDO0.7210.0660.5160.009
Rv3061c.132h79_T3_A_1PDBCREDO0.7010.0800.5160.009
Rv3061c.133mnp_DEX_A_784PDBCREDO0.6160.1600.5160.009
Rv3061c.1101kij_NOV_A_400PDBCREDO0.6270.1480.5160.009
Rv3061c.131nhz_486_A_800PDBCREDO0.7240.0640.5150.009
Rv3061c.233k5v_STI_A_2PDBCREDO0.7180.0680.5140.009
Rv3061c.133ln1_CEL_C_682PDBCREDO0.6750.1010.5130.009
Rv3061c.231hsh_MK1_C_402PDBCREDO0.6610.1140.5130.009
Rv3061c.231sdu_MK1_B_902PDBCREDO0.5950.1850.5130.009
Rv3061c.233oez_STI_A_601PDBCREDO0.7590.0430.5130.009
Rv3061c.231err_RAL_B_600PDBCREDO0.8800.0050.5130.009
Rv3061c.233d20_017_A_201PDBCREDO0.5370.2620.5130.009
Rv3061c.133ln1_CEL_B_682PDBCREDO0.6740.1020.5130.009
Rv3061c.231c6y_MK1_B_524PDBCREDO0.6590.1150.5130.009
Rv3061c.133ln1_CEL_A_682PDBCREDO0.6730.1030.5120.009
Rv3061c.231err_RAL_A_600PDBCREDO0.8790.0050.5120.009
Rv3061c.232jfa_RAL_B_600PDBCREDO0.8780.0050.5120.009
Rv3061c.1103oez_STI_B_601PDBCREDO0.5270.2770.5110.009
Rv3061c.231n49_RIT_D_401PDBCREDO0.7550.0450.5110.009
Rv3061c.132r5q_1UN_D_900PDBCREDO0.5410.2570.5110.009
Rv3061c.233el1_DR7_A_100PDBCREDO0.5910.1890.5100.009
Rv3061c.131s9p_DES_D_600PDBCREDO0.7940.0270.5100.009
Rv3061c.231sh9_RIT_B_301PDBCREDO0.6560.1180.5100.009
Rv3061c.132r5q_1UN_B_900PDBCREDO0.5400.2580.5100.009
Rv3061c.233el9_DR7_A_100PDBCREDO0.6550.1190.5100.009
Rv3061c.2133g0e_B49_A_9000PDBCREDO0.5290.2740.5080.010
Rv3061c.133erd_DES_B_800PDBCREDO0.8190.0180.5070.010
Rv3061c.131t46_STI_A_3PDBCREDO0.5820.2010.5070.010
Rv3061c.133ogq_AB1_A_200PDBCREDO0.6290.1460.5070.010
Rv3061c.233cyw_017_A_201PDBCREDO0.5050.3100.5050.010
Rv3061c.1103hec_STI_A_1PDBCREDO0.5210.2860.5050.010
Rv3061c.233d1x_ROC_A_201PDBCREDO0.6050.1730.5050.010
Rv3061c.131sa1_POD_B_700PDBCREDO0.5500.2450.5040.010
Rv3061c.131uwj_BAX_B_1723PDBCREDO0.5480.2460.5030.010
Rv3061c.133vhu_SNL_A_1001PDBCREDO0.6200.1560.5030.010
Rv3061c.233s43_478_A_401PDBCREDO0.5400.2580.5030.010
Rv3061c.233rgf_BAX_A_465PDBCREDO0.7220.0650.5020.011
Rv3061c.132oax_SNL_B_2001PDBCREDO0.6190.1570.5020.011
Rv3061c.2131wu8_ADN_A_500PDBCREDO0.5670.2200.5020.011
Rv3061c.231sdv_MK1_B_902PDBCREDO0.6280.1470.5020.011
Rv3061c.132q64_1UN_B_1001PDBCREDO0.6540.1210.5020.011
Rv3061c.231ohr_1UN_A_201PDBCREDO0.6450.1290.5010.011
Rv3061c.131s9p_DES_A_459PDBCREDO0.7800.0330.5010.011
Rv3061c.231t3r_017_A_1200PDBCREDO0.5250.2790.5010.011
Rv3061c.233nuj_478_B_401PDBCREDO0.5510.2420.5000.011
Rv3061c.1102hyy_STI_B_600PDBCREDO0.5320.2700.5000.011
Rv3061c.132o4n_TPV_A_300PDBCREDO0.5790.2040.5000.011
Rv3061c.133erd_DES_A_600PDBCREDO0.8070.0220.5000.011
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
Chemical NameConfidence scoreMolecular Weight
pyrophosphatePubChem0.9177.975
adenosine triphosphatePubChem0.9507.181
NSC112207PubChem0.9785.55
coenzyme APubChem0.9767.534
H(+)PubChem0.92.01588
1,5-dihydro-FADPubChem0.9787.566
FADH2PubChem0.9787.566
hydroxyl radicalsPubChem0.917.0073
adenosine monophosphatePubChem0.9347.221
formatePubChem0.945.0174
AR-1A9122PubChem0.9787.566
flavin adenine dinucleotidePubChem0.9785.55
Co-APubChem0.9767.534
deuteriumPubChem0.92.01588
protiumPubChem0.92.01576