Rv1642

Tuberculist information
Gene namerpmI
Protein function50S ribosomal protein L35 RpmI
Functional category(tuberculist)information pathways
Gene location(kb)1852.93
Molecular mass(da)7220.35
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 64
	  		  	1    MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS   60
			  	61   LLNG

Known structures in the PDB
No Known structures
1 7 13 19 25 31 37 43 49 55 61 Range: 2 to 62  |  Coverage: 93% Ribosomal_L35p Range: 2 to 63  |  Coverage: 95% 1 Range: 1 to 64  |  Coverage: 98% 1
Number of amino acids : 64
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
Ribosomal_L35pPF016322-62
Mtb Structural Proteome models
Model Number1
Model nameRv1642
Template2AW4    3PDBCREDO
Template coverage1_62
Template Identity(%)40.3
Model coverage(%)95.3
Normalized DOPE score1.039

Structure Models from Chopin
Model Number1
Profiled.301.1.1
Click for model details
zscore14.46
Residue begin1
Residue end64
Binding pockets
STRING
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Protein interacting with Rv1642Gene nameConfidence Score
Rv1643rplT0.99
Rv1641infC0.985
Rv1641infC0.985
Rv2614cthrS0.93
Rv2614cthrS0.93
Rv2614cthrS0.93
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
No high confidence interactions