Rv3923c

Tuberculist information
Gene namernpA
Protein functionRibonuclease P protein component RnpA (RNaseP protein) (RNase P protein) (protein C5)
Functional category(tuberculist)information pathways
Gene location(kb)4410.41
Molecular mass(da)13924.2
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 125
	  		  	1    LIATPGLFAVLRARNRMRRSADFETTVKHGMRTVRSDMVVYWWRGSGGGPRVGLIIAKSV   60
			  	61   GSAVERHRVARRLRHVAGSIVKELHPSDHVVIRALPSSRHVSSARLEQQLRCGLRRAVEL  120
			  	121  AGSDR

Known structures in the PDB
No Known structures
1 13 25 37 49 61 73 85 97 109 121 Range: 2 to 109  |  Coverage: 85% Ribonuclease_P Range: 9 to 121  |  Coverage: 89% 1 Range: 8 to 125  |  Coverage: 93% 1
Number of amino acids : 125
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
Ribonuclease_PPF008252-109
Mtb Structural Proteome models
Model Number1
Model nameRv3923c
Template1A6F    APDBCREDO
Template coverage2_114
Template Identity(%)26.5
Model coverage(%)89.6
Normalized DOPE score-0.703

Structure Models from Chopin
Model Number1
Profiled.14.1.2 - 3.30.230.10
Click for model details
zscore20.75
Residue begin8
Residue end125
Binding pockets
STRING
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Protein interacting with Rv3923cGene nameConfidence Score
Rv3924crpmH0.988
Rv3922cRv3922c0.967
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
No high confidence interactions