Rv3920c

Tuberculist information
Gene nameRv3920c
Protein functionConserved protein similar to jag protein
Functional category(tuberculist)conserved hypotheticals
Gene location(kb)4408.33
Molecular mass(da)20558.6
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 187
	  		  	1    MADADTTDFDVDAEAPGGGVREDTATDADEADDQEERLVAEGEIAGDYLEELLDVLDFDG   60
			  	61   DIDLDVEGNRAVVSIDGSDDLNKLVGRGGEVLDALQELTRLAVHQKTGVRSRLMLDIARW  120
			  	121  RRRRREELAALADEVARRVAETGDREELVPMTPFERKIVHDAVAAVPGVHSESEGVEPER  180
			  	181  RVVVLRD

Known structures in the PDB
No Known structures
1 19 37 55 73 91 109 127 145 163 181 Range: 43 to 115  |  Coverage: 38% KH_4 Range: 131 to 187  |  Coverage: 29% R3H Range: 117 to 186  |  Coverage: 36% 1 Range: 39 to 118  |  Coverage: 42% 1
Number of amino acids : 187
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
KH_4PF1308343-115
R3HPF01424131-187
Mtb Structural Proteome models
Model Number1
Model nameRv3920c
Template2CPM    APDBCREDO
Template coverage38_107
Template Identity(%)27.1
Model coverage(%)36.9
Normalized DOPE score-0.237

Structure Models from Chopin
Model Number1
Profile3.30.300.120
Click for model details
zscore16.42
Residue begin39
Residue end118
Binding pockets
STRING
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Protein interacting with Rv3920cGene nameConfidence Score
Rv3921cRv3921c0.931
Rv3922cRv3922c0.922
Rv3924crpmH0.916
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
No high confidence interactions