Rv3250c

Tuberculist information
Gene namerubB
Protein functionProbable rubredoxin RubB
Functional category(tuberculist)intermediary metabolism and respiration
Gene location(kb)3630.38
Molecular mass(da)6765.42
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 60
	  		  	1    VNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDFEMVEVARS   60

Known structures in the PDB
PDB ID2KN9
Total residue count81
Number of chains1
MethodNMR
ResolutionN/A
1 7 13 19 25 31 37 43 49 55 61 Range: 6 to 52  |  Coverage: 76% Rubredoxin Range: 4 to 56  |  Coverage: 86% 1 Range: to   |  Coverage: 0% 1
Number of amino acids : 60
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
RubredoxinPF003016-52
Mtb Structural Proteome models
Model Number1
Model nameRv3250c
Template4RXN    APDBCREDO
Template coverage1_53
Template Identity(%)50.9
Model coverage(%)86.7
Normalized DOPE score-0.984

Structure Models from Chopin
Model Number1
Profileg.41.5.1 - 2.20.28.10
Click for model details
zscore13.87
Residue begin
Residue end
Binding pockets
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv3250cGene nameConfidence Score
Rv3252calkB0.993
Rv3251crubA0.93
Rv2678chemE0.909
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
Chemical NameConfidence scoreMolecular Weight
Fe(III)PubChem0.84755.845