Rv2553c

Tuberculist information
Gene nameRv2553c
Protein functionProbable conserved membrane protein
Functional category(tuberculist)cell wall and cell processes
Gene location(kb)2872.01
Molecular mass(da)45473.8
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 417
	  		  	1    MPDGGHRHRAQPVSVRPNRHRRTRVSRAQRRHAQQIRRRRRVAGGFALSLLVVVVVVAVV   60
			  	61   VGAKLWQTMLGFGNDYTGPGKRDIVIQIRAGDSTTAVGETLLKHGVVATVRAFVDAAHGN  120
			  	121  TAISSIQPGFYRMRTEISAASAVARLTDPHNRVGKLVIPEGRQLDDTTDMKTNVVNPGIF  180
			  	181  ALISRATCVDLDGTQRCVSVADLRAAASRSTPTMLSVPRWAVGPVMELGTDHRRIEGLIA  240
			  	241  PGTFNIDPSASAETILATLISAGAVEYMKSGLVDTAKSLGLSPYDILVVASLVQQEANTQ  300
			  	301  DFPKVARVIYNRLHEHRTLEFDSTVNYPLDRREVATSDTDRAQRTPWNTYMAQGLPATAI  360
			  	361  CSPGVDALRAAEHPVPGDWLYFVTIDSQGTTLFTRDYQQHLANIELAKHNGVLDSAR

Known structures in the PDB
No Known structures
1 42 83 124 165 206 247 288 329 370 411 Range: 84 to 407  |  Coverage: 77% YceG
Number of amino acids : 417
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
YceGPF0261884-407
Mtb Structural Proteome models
Structure models not available for this query
Structure Models from Chopin
CHOPIN models not available for this query
Binding pockets
Structure models not available for this query
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv2553cGene nameConfidence Score
Rv2554cRv2554c0.96
Rv2552caroE0.921
Rv2555calaS0.921
Rv2555calaS0.921
Rv2555calaS0.921
Rv2552caroE0.921
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
Chemical NameConfidence scoreMolecular Weight
thymidylatePubChem0.903322.208
thymidine triphosphatePubChem0.9482.168
adenosine triphosphatePubChem0.9507.181
dUMPPubChem0.9308.182
5,10-methylenetetrahydrofolatePubChem0.9457.44
N5,N10-methylenetetrahydrofolatePubChem0.9457.44
adenosine diphosphatePubChem0.9427.201
dihydrofolatePubChem0.9443.413
deuteriumPubChem0.92.01588
H(+)PubChem0.92.01588
thymidine diphosphatePubChem0.9402.188
protiumPubChem0.92.01576