Rv2554c

Tuberculist information
Gene nameRv2554c
Protein functionConserved protein
Functional category(tuberculist)conserved hypotheticals
Gene location(kb)2873.26
Molecular mass(da)18033.4
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 170
	  		  	1    VVPAQHRPPDRPGDPAHDPGRGRRLGIDVGAARIGVACSDPDAILATPVETVRRDRSGKH   60
			  	61   LRRLAALAAELEAVEVIVGLPRTLADRIGRSAQDAIELAEALARRVSPTPVRLADERLTT  120
			  	121  VSAQRSLRQAGVRASEQRAVIDQAAAVAILQSWLDERLAAMAGTQEGSDA

Known structures in the PDB
No Known structures
1 18 35 52 69 86 103 120 137 154 171 Range: 22 to 156  |  Coverage: 78% UPF0081 Range: 23 to 156  |  Coverage: 78% 1 Range: 19 to 159  |  Coverage: 82% 1
Number of amino acids : 170
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
UPF0081PF0365222-156
Mtb Structural Proteome models
Model Number1
Model nameRv2554c
Template1VHX    APDBCREDO
Template coverage2_136
Template Identity(%)34.3
Model coverage(%)78.2
Normalized DOPE score-0.923

Structure Models from Chopin
Model Number1
Profilec.55.3.8 - 3.30.420.140
Click for model details
zscore27.07
Residue begin19
Residue end159
Binding pockets
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv2554cGene nameConfidence Score
Rv2555calaS0.971
Rv2555calaS0.971
Rv2555calaS0.971
Rv2553cRv2553c0.96
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
Chemical NameConfidence scoreMolecular Weight
selenomethioninePubChem0.739196.106
SeMetPubChem0.739196.106