Rv1884c

Tuberculist information
Gene namerpfC
Protein functionProbable resuscitation-promoting factor RpfC
Functional category(tuberculist)cell wall and cell processes
Gene location(kb)2133.73
Molecular mass(da)18014.5
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 176
	  		  	1    VHPLPADHGRSRCNRHPISPLSLIGNASATSGDMSSMTRIAKPLIKSAMAAGLVTASMSL   60
			  	61   STAVAHAGPSPNWDAVAQCESGGNWAANTGNGKYGGLQFKPATWAAFGGVGNPAAASREQ  120
			  	121  QIAVANRVLAEQGLDAWPTCGAASGLPIALWSKPAQGIKQIINEIIWAGIQASIPR

Known structures in the PDB
No Known structures
1 18 35 52 69 86 103 120 137 154 171 Range: 67 to 140  |  Coverage: 41% Transglycosylas Range: 52 to 146  |  Coverage: 53% 1
Number of amino acids : 176
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
TransglycosylasPF0673767-140
Mtb Structural Proteome models
Model Number1
Model nameRv1884c
Template1XSF    APDBCREDO
Template coverage10_107
Template Identity(%)47.4
Model coverage(%)53.4
Normalized DOPE score-0.317

Structure Models from Chopin
CHOPIN models not available for this query
Binding pockets
STRING
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Protein interacting with Rv1884cGene nameConfidence Score
Rv1885cRv1885c0.948
Rv1883cRv1883c0.939
Rv1882cRv1882c0.933
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
No high confidence interactions