Rv0913c

Tuberculist information
Gene nameRv0913c
Protein functionPossible dioxygenase
Functional category(tuberculist)intermediary metabolism and respiration
Gene location(kb)1017.22
Molecular mass(da)56639.1
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 502
	  		  	1    MDITIVGKYLSTLPEDDDHPYRTGPWRPQTTEWDADDLTTVTGEVPADLDGIYLRNTENP   60
			  	61   LHPAFATYHPFDGDGMIHVVGFRDGKAFYRNRFIRTDGFLAENEAGGPLWPGLAEPVQLA  120
			  	121  KREHGWGARGLMKDASSTDVIVHRGIALTSFYQCGDLYRIDPYSANTLGKESWHGRFPFD  180
			  	181  WGVSAHPKVDNKTGELLFFNYSKQEPYMRYGVVDQNNELVHYVDVPLPGPRLPHDMAFTE  240
			  	241  NYVILNDFPLFWDPRLLERDVHLPRFYPEIPSRFAVVARRGNDIRWFEADPTFVLHFTNA  300
			  	301  YEQGDEIVLDGFYEGDPQPLDTGGTKWEKLFRFLALDRLQSRLHRWRLNMVTGAVHEEQL  360
			  	361  SESITEFGTINADYAASSYRYTYAATGKPSWFLFDGLVKHDLLTGNHECYSFGDGVYGSE  420
			  	421  TAMAPRVGSSAEDDGYLVTLTTDMNDDASYCLVFDAARPGDGPICKLALPERISSGTHSA  480
			  	481  WVPGAELRRWDHAESPAAAVGL

Known structures in the PDB
No Known structures
1 51 101 151 201 251 301 351 401 451 501 Range: 23 to 484  |  Coverage: 91% RPE65 Range: 17 to 484  |  Coverage: 93% 1
Number of amino acids : 502
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
RPE65PF0305523-484
Mtb Structural Proteome models
Model Number1
Model nameRv0913c
Template2BIW    APDBCREDO
Template coverage16_490
Template Identity(%)25.2
Model coverage(%)92.8
Normalized DOPE score-0.172

Structure Models from Chopin
CHOPIN models not available for this query
Binding pockets
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv0913cGene nameConfidence Score
Rv0914cRv0914c0.968
Rv0914cRv0914c0.968
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
Chemical NameConfidence scoreMolecular Weight
C04547PubChem0.9272.296
vanillinPubChem0.9152.147
molecular oxygenPubChem0.931.9988