Rv2413c

Tuberculist information
Gene nameRv2413c
Protein functionConserved hypothetical protein
Functional category(tuberculist)conserved hypotheticals
Gene location(kb)2710.35
Molecular mass(da)33113.7
External sites TB Database TubercuList WebTB
Protein sequence
Number of amino acids : 316
	  		  	1    LHLVLGDEELLVERAVADVLRSARQRAGTADVPVSRMRAGDVGAYELAELLSPSLFAEER   60
			  	61   IVVLGAAAEAGKDAAAVIESAAADLPAGTVLVVVHSGGGRAKSLANQLRSMGAQVHPCAR  120
			  	121  ITKVSERADFIRSEFASLRVKVDDETVTALLDAVGSDVRELASACSQLVADTGGAVDAAA  180
			  	181  VRRYHSGKAEVRGFDIADKAVAGDVAGAAEALRWAMMRGEPLVVLADALAEAVHTIGRVG  240
			  	241  PQSGDPYRLAAQLGMPPWRVQKAQKQARRWSRDTVATAMRLVAELNANVKGAVADADYAL  300
			  	301  ESAVRQVAELVADRGR

Known structures in the PDB
No Known structures
1 32 63 94 125 156 187 218 249 280 311 Range: 2 to 170  |  Coverage: 53% DNA_pol3_delta Range: 2 to 308  |  Coverage: 96% 1 Range: 193 to 314  |  Coverage: 38% 1
Number of amino acids : 316
Domains assigned based on sequence. Mtb Structural proteome models CHOPIN models
Profile-based domain assignment
Structural/Functional domain familyPfam acc.no./SCOP IDDomain Region
DNA_pol3_deltaPF061442-170
Mtb Structural Proteome models
Model Number1
Model nameRv2413c
Template1JR3    DPDBCREDO
Template coverage21_332
Template Identity(%)17.3
Model coverage(%)96.8
Normalized DOPE score0.654

Structure Models from Chopin
Model Number1
Profile1.20.272.20
Click for model details
zscore11.18
Residue begin193
Residue end314
Binding pockets
STRING
Cytoscape Web will replace the contents of this div with protein-protein interaction network.
Protein interacting with Rv2413cGene nameConfidence Score
Rv2445cndkA0.906
Potential ligand/drug binding sites
No binding sites identified
Similarity to known drug target from sensitive sequence analysis
No drug targets
List of small molecules tested from TIBLE
Data not available
Off-target activity - ligand based from TIBLE
Data not available
Small molecules involved in protein-protein complex from TIMBAL .Proteins similar to Mtb based on sequence analysis.
Data not available
STITCH interactions  
Chemical NameConfidence scoreMolecular Weight
thymidine triphosphatePubChem0.9482.168
deoxyadenosine triphosphatePubChem0.9491.182
deoxyguanosine triphosphatePubChem0.9507.181
deoxycytidine triphosphatePubChem0.9467.157