AllegroMCODE Plugin Results
-Date: Nov 18, 2013 5:30:07 PM

-Network Identifier: all_pairs_70andabovePMAX_out_withcutoffpvalue.txt

-Parameters:
	Node Scoring:
		Include Loops:false, Degree Cutoff:2
	Cluster Finding:
		 Node Score Cutoff: 0.2,  K-Core: 2,  Max. Depth from Seed: 100
	Post-Processing:
		From Selection: false, Haircut: true, Fluff: false

-Clusters:
Id	Rank	Score	Nodes	Edges	Node IDs
1	1	1.615	13	21	2407_r4_complete, 1004c_r5_complet, 0980c_r3_complet, 3629c_r2_complet, 1747.1_r6_comple, 1230c_r1_complet, 0973c.1_r20_comp, 0480c_r22_comple, 2908c_r4_complet, 2589_r4_complete, 1158c_r2_complet, 1004c_r15_comple, 0015c.1_r9_compl
2	2	1.5	4	6	0620_r5_complete, 1317c.2_r1_compl, 2524c.12_r12_com, 1276c_r1_complet
3	3	1.5	4	6	2690c_r5_complet, 2276_r2_complete, 2192c_r3_complet, 1272c_r11_comple
4	4	1.5	8	12	2194_r2_complete, 1863c_r3_complet, 0761c_r6_complet, 2728c_r1_complet, 0849_r8_complete, 2679_r9_complete, 1761c_r2_complet, 0089_r7_complete
5	5	1.5	4	6	3541c_r2_complet, 3319_r6_complete, 0527_r9_complete, 0527_r1_complete
6	6	1.5	4	6	3521_r2_complete, 2897c_r7_complet, 3825c.8_r1_compl, 3871_r6_complete
7	7	1.4	5	7	0941c.1_r1_compl, 3791_r12_complet, 3206c.2_r2_compl, 1601_r5_complete, 0435c_r21_comple
8	8	1.4	5	7	3242c_r2_complet, 3923c_r1_complet, 2813_r4_complete, 2393.2_r4_comple, 0538_r1_complete
9	9	1.286	7	9	2209.1_r2_comple, 1941_r2_complete, 1457c_r3_complet, 0732_r7_complete, 1795_r7_complete, 0978c_r5_complet, 0166_r7_complete
10	10	1.25	4	5	3011c_r27_comple, 2842c_r4_complet, 1141c_r2_complet, 0274_r3_complete
11	11	1.25	4	5	1838c_r2_complet, 1675c_r6_complet, 0343_r3_complete, 0194.1_r4_comple
12	12	1.25	4	5	3072c_r1_complet, 2629_r8_complete, 2158c_r10_comple, 0687_r10_complet
13	13	1.25	4	5	1358_r13_complet, 3700c_r12_comple, 2988c_r6_complet, 0904c_r4_complet
14	14	1.167	6	7	1918c_r3_complet, 1863c_r15_comple, 0557_r18_complet, 0291.1_r16_compl, 0148_r2_complete, 3910_r7_complete
15	15	1	3	3	2982c_r5_complet, 2383c.4_r13_comp, 1086_r2_complete
16	16	1	3	3	3729_r2_complete, 1125_r5_complete, 1248c.2_r5_compl
17	17	1	3	3	3029c_r1_complet, 2381c.5_r3_compl, 0070c_r4_complet
18	18	1	3	3	1683.3_r11_compl, 1400c_r5_complet, 2029c_r1_complet
19	19	1	3	3	2683_r4_complete, 0304c_r5_complet, 0125_r4_complete
20	20	1	3	3	3448_r5_complete, 0651_r2_complete, 3573c.1_r1_compl
21	21	1	3	3	2075c_r1_complet, 1066_r2_complete, 0512_r3_complete
22	22	1	3	3	2383c.3_r3_compl, 1666c_r6_complet, 3087_r4_complete
23	23	1	3	3	3702c_r2_complet, 3224_r2_complete, 0702_r4_complete
24	24	1	3	3	3158.2_r1_comple, 1181_r2_complete, 0767c_r2_complet
25	25	1	3	3	3757c_r2_complet, 1877_r6_complete, 0843_r3_complete
26	26	1	3	3	3825c.3_r4_compl, 1979c_r6_complet, 1181.3_r4_comple
27	27	1	3	3	3144c_r4_complet, 1800_r4_complete, 1361c_r3_complet
28	28	1	3	3	3021c_r2_complet, 3585_r35_complet, 1438_r1_complete
29	29	1	3	3	3578_r3_complete, 2677c_r2_complet, 1832_r5_complete