Content-Type: text/html; charset=ISO-8859-1 SUPERFAMILY Assignment Results

SUPERFAMILY Assignment Results

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Seq_ID	Match_region	Superfamily E_value	SCOP superfamily	Family E_value	SCOP family	Closest structure	Alignment
PF12054.3\|Q54M42_DICDI/670-1136	90-384	1.28e-03	ARM repeat	0.050	Clathrin adaptor core protein	1gw5 B:	NLEYLNIRSKIIGSTAVGLIVRMW----------------------PIED INEIQDMFYSMLTSISGLHRHLASLILAEAYSAES--------------- ---------------------------------------QPNQPPMFQLP PNTIQFLNQHLLEE--------------------------LENRTTVNYY MEATNIVSNKLVSD---------------VRVLASSLLNVGVDFSGVE-- ---------LLNILSNPSIQLPYEQIMPYAVELVTNVYDFcVGYIRqlpq pQ------------------------------------------------ ------------------------------------------QQQQQQPS NTIELII--DQLeARK-------KTILVTiGFVEKIQTEYHT-------- -----QVLSEMSTLLivsnNIPpKVSAIVRSLMLAIrKDENPLYQLRAAR SLSQFIEMS-----------LTRTPCPNPKIISSMFTLLCDDHTET

Seq_ID

Match_region

Superfamily E_value

SCOP superfamily

Family E_value

SCOP family

Closest structure

Alignment

PF12054.3|Q54M42_DICDI/670-1136

90-384

1.28e-03

ARM repeat

0.050

Clathrin adaptor core protein

1gw5 B:

NLEYLNIRSKIIGSTAVGLIVRMW----------------------PIED
INEIQDMFYSMLTSISGLHRHLASLILAEAYSAES---------------
---------------------------------------QPNQPPMFQLP
PNTIQFLNQHLLEE--------------------------LENRTTVNYY
MEATNIVSNKLVSD---------------VRVLASSLLNVGVDFSGVE--
---------LLNILSNPSIQLPYEQIMPYAVELVTNVYDFcVGYIRqlpq
pQ------------------------------------------------
------------------------------------------QQQQQQPS
NTIELII--DQLeARK-------KTILVTiGFVEKIQTEYHT--------
-----QVLSEMSTLLivsnNIPpKVSAIVRSLMLAIrKDENPLYQLRAAR
SLSQFIEMS-----------LTRTPCPNPKIISSMFTLLCDDHTET